Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC245100.2-201ENST00000454544 1679 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL359195.2-201ENST00000623657 4412 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 RPL24P4-201ENST00000326586 421 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 IGKV7-3-201ENST00000357453 298 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 RNA5SP65-201ENST00000363166 119 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 U3.14-201ENST00000365363 227 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 SNORD116-23-201ENST00000384645 92 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL356776.1-201ENST00000406574 447 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 RN7SKP129-201ENST00000410288 299 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 NIPA2P1-201ENST00000426223 976 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 TXNP5-201ENST00000441043 315 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL512605.1-202ENST00000441919 381 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 MTCO3P20-201ENST00000454926 688 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 RBM43P1-201ENST00000476891 1081 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 ACTR3P3-201ENST00000480448 893 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 RPL15P21-201ENST00000495592 567 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC063943.2-201ENST00000495697 534 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 RN7SKP242-201ENST00000515967 289 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 RNU6-1153P-201ENST00000516760 105 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 OR5D2P-201ENST00000524390 911 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 DEFB131D-201ENST00000526803 184 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL135978.1-201ENST00000553618 1266 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 CYCSP2-201ENST00000558168 301 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC026458.1-201ENST00000564330 438 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 MIR3159-201ENST00000584572 74 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC009977.1-201ENST00000586015 570 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC005261.5-201ENST00000596280 355 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC092032.1-201ENST00000603090 165 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC005070.2-201ENST00000604391 260 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC007363.1-201ENST00000604736 620 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC023206.1-201ENST00000605824 298 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC018690.1-201ENST00000608144 626 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC018926.3-201ENST00000618841 406 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL161420.1-201ENST00000619393 264 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 FRG1KP-201ENST00000623592 341 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC145207.9-201ENST00000623802 325 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC110994.2-201ENST00000635481 492 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AL356585.10-201ENST00000641883 123 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC006026.1-201ENST00000444025 1803 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC021242.1-201ENST00000507315 2035 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 AC093278.2-201ENST00000564956 2485 ntBASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.52□□□□□ -1.37
BHLHE41Q9C0J9 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 AC020658.2-201ENST00000559030 4020 ntBASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 UGT2B27P-201ENST00000505092 1620 ntBASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 RPL5P20-201ENST00000403848 896 ntBASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 AL136133.1-201ENST00000413694 376 ntBASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 AL139128.1-201ENST00000413921 941 ntBASIC6.51□□□□□ -1.37
BHLHE41Q9C0J9 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms