Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 PGAM1P13-201ENST00000507497 754 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 RN7SKP141-201ENST00000516167 338 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 YWHABP2-201ENST00000540201 713 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AC090525.3-201ENST00000605601 189 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AC015802.5-201ENST00000607478 399 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AC011933.2-201ENST00000578539 2790 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 MTND4P31-201ENST00000425607 1343 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 AC104260.2-201ENST00000623551 3497 ntBASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CHMP4AQ9BY43 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AC009951.1-201ENST00000623674 2614 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 RNU1-19P-201ENST00000363306 165 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 U3.28-201ENST00000391249 210 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 RPSAP35-201ENST00000413753 818 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AL133482.1-201ENST00000415988 498 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AC108075.1-201ENST00000424692 529 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AL627308.1-201ENST00000435693 821 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AC092685.1-201ENST00000447960 1243 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AC107398.1-201ENST00000486904 505 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 CBX3P2-202ENST00000583365 535 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 SUMO2P14-201ENST00000604488 293 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AP003400.3-201ENST00000624904 346 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 PABPC1P6-201ENST00000445594 1829 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 CASC19-204ENST00000641001 2055 ntBASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHMP4AQ9BY43 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 Z73965.1-201ENST00000623412 2297 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 RN7SKP185-201ENST00000362813 326 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 RNU6-317P-201ENST00000384031 107 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 ZNF965P-201ENST00000432501 817 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 PPIAP13-201ENST00000434706 478 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC079841.1-201ENST00000481228 950 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 RN7SL423P-201ENST00000486202 304 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC025459.1-201ENST00000504072 156 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC079064.1-201ENST00000528365 362 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC022832.1-201ENST00000530718 645 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AL512624.1-201ENST00000613638 469 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC090527.3-201ENST00000619041 548 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC138965.3-201ENST00000623875 498 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC135068.5-201ENST00000624197 983 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC116563.2-201ENST00000624751 535 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 SAMMSON-227ENST00000642114 1199 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC092451.3-201ENST00000625067 1343 ntBASIC6.9□□□□□ -1.3
CHMP4AQ9BY43 AC138907.8-201ENST00000623981 2256 ntBASIC6.9□□□□□ -1.31
CHMP4AQ9BY43 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHMP4AQ9BY43 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHMP4AQ9BY43 AC092162.3-201ENST00000624511 1624 ntBASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms