Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC006206.1-201ENST00000544842 3387 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 AC010329.1-201ENST00000593903 8328 ntBASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RTFDC1Q9BY42 HSPD1P14-201ENST00000432666 1618 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 CASC19-221ENST00000641309 1382 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 RNU6-666P-201ENST00000363499 107 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 SNORD56.4-201ENST00000363883 71 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AL034374.1-201ENST00000406329 351 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 GJA6P-201ENST00000415117 1042 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 DDX39BP1-205ENST00000422507 192 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 RPL7P56-201ENST00000429441 717 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 H3F3BP1-201ENST00000440551 403 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC093815.1-201ENST00000508637 280 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 ST13P12-201ENST00000508958 1094 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 GAPDHP62-201ENST00000515313 990 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AP003066.2-201ENST00000529375 555 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AP003717.3-201ENST00000544832 1180 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AP000769.2-201ENST00000602344 396 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AL022394.1-201ENST00000606979 292 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC034229.4-201ENST00000607861 441 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 EIF3FP1-201ENST00000613970 806 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 RMST_10.1-201ENST00000616309 154 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 OR4G3P-201ENST00000633500 913 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC083865.1-201ENST00000636634 831 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC006927.2-201ENST00000639256 389 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 HSPA8P14-201ENST00000552265 1805 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AC083899.1-201ENST00000454465 3819 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 VPS35P1-201ENST00000563400 1518 ntBASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RTFDC1Q9BY42 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 MAPK10-338ENST00000641647 3362 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 RN7SKP149-201ENST00000363008 344 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 MIR192-201ENST00000384915 110 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 MIR122-201ENST00000385044 85 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 MIR1182-201ENST00000408363 97 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 RAB28P1-201ENST00000411517 641 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 COX6B1P1-201ENST00000415962 213 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 MGAT2P2-201ENST00000427194 797 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC011753.3-201ENST00000443436 406 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 RPL34P26-201ENST00000445636 354 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC044797.1-201ENST00000445744 679 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 KNOP1P3-201ENST00000446933 426 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 RPS20P4-201ENST00000461659 355 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC008427.1-201ENST00000503102 655 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms