Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 AL390334.1-201ENST00000556395 450 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC009852.2-201ENST00000567898 485 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC110743.1-201ENST00000584870 478 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC006363.1-201ENST00000603806 463 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC007786.3-201ENST00000615154 596 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC006249.1-201ENST00000621223 471 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 CU639417.4-201ENST00000623928 207 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AL590396.2-201ENST00000636511 1041 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 AC006042.3-201ENST00000454684 1469 ntBASIC5.26□□□□□ -1.57
TREX2Q9BQ50 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.26□□□□□ -1.57
TREX2Q9BQ50 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 RNA5SP27-201ENST00000363839 119 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 RNU4-34P-201ENST00000410431 124 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 NPM1P4-201ENST00000414095 812 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AL158825.1-201ENST00000414735 521 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC019050.1-201ENST00000418508 492 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC127526.2-201ENST00000426436 775 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 ETF1P3-201ENST00000430422 1160 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 GAPDHP58-201ENST00000438477 1006 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 MED28P3-201ENST00000444288 531 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 LRRC37A14P-201ENST00000452297 462 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AL035407.2-201ENST00000454090 378 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 RN7SL610P-201ENST00000463845 291 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 RN7SL727P-201ENST00000482164 296 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 PPM1AP1-201ENST00000502740 1135 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 DUTP7-201ENST00000507982 486 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 PMS2P3-207ENST00000529061 717 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 IMMP1LP3-201ENST00000604197 224 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 MIR6133-201ENST00000617057 108 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC118658.2-201ENST00000618697 459 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC138907.10-201ENST00000623708 983 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AL451142.2-201ENST00000429076 2090 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 HSPA8P14-201ENST00000552265 1805 ntBASIC5.25□□□□□ -1.57
TREX2Q9BQ50 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 AL603750.1-201ENST00000624216 1717 ntBASIC5.24□□□□□ -1.57
TREX2Q9BQ50 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TREX2Q9BQ50 RNA5SP443-201ENST00000363083 132 ntBASIC5.24□□□□□ -1.57
TREX2Q9BQ50 RN7SKP145-201ENST00000363291 303 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms