Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX3Q99909 MAPK10-304ENST00000641341 3984 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSX3Q99909 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX3Q99909 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX3Q99909 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSX3Q99909 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SSX3Q99909 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSX3Q99909 RPS27AP11-201ENST00000402798 447 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 CCT8P1-201ENST00000413611 1657 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 TRGV6-201ENST00000417928 299 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX3Q99909 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX3Q99909 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 VN1R21P-201ENST00000426703 765 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 AC000374.1-201ENST00000434698 1745 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 GAPDHP48-201ENST00000436626 961 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX3Q99909 AC239809.1-201ENST00000450470 217 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX3Q99909 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX3Q99909 RPL23AP12-201ENST00000467573 473 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SSX3Q99909 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX3Q99909 RN7SL466P-201ENST00000497546 295 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SSX3Q99909 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX3Q99909 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX3Q99909 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX3Q99909 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSX3Q99909 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.59□□□□□ -1.67
SSX3Q99909 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX3Q99909 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX3Q99909 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX3Q99909 AC027176.2-201ENST00000559166 746 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.59□□□□□ -1.67
SSX3Q99909 RBM22P12-201ENST00000567098 1255 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX3Q99909 AL513327.3-201ENST00000602618 469 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.59□□□□□ -1.67
SSX3Q99909 AC109309.2-201ENST00000612597 332 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 AL731532.2-201ENST00000623542 1953 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 AC073592.7-201ENST00000623659 507 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 CU639417.4-201ENST00000623928 207 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.59□□□□□ -1.67
SSX3Q99909 OR51H2P-202ENST00000641424 3046 ntBASIC4.59□□□□□ -1.67
SSX3Q99909 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SSX3Q99909 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.59□□□□□ -1.68
SSX3Q99909 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SSX3Q99909 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSX3Q99909 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX3Q99909 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 AL034549.2-201ENST00000618285 3373 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 LINC01963-201ENST00000562038 3148 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.58□□□□□ -1.68
SSX3Q99909 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX3Q99909 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 SNORA48.4-201ENST00000391089 134 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 U3.25-201ENST00000391209 220 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 OR3A2-201ENST00000408891 1076 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 RPS6P23-201ENST00000413224 722 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.58□□□□□ -1.68
SSX3Q99909 MARK2P12-201ENST00000420129 585 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 AC012519.1-201ENST00000424588 610 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 AC009784.1-201ENST00000426484 460 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.58□□□□□ -1.68
SSX3Q99909 FMO7P-201ENST00000436045 768 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 AC092691.2-201ENST00000461787 803 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 CABYRP1-201ENST00000465493 1045 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 MTND6P6-201ENST00000478031 263 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 RPS3AP15-201ENST00000483874 781 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSX3Q99909 AC108120.2-201ENST00000512973 294 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 RNA5SP362-201ENST00000516048 118 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 SCARNA21.2-201ENST00000516600 166 ntBASIC4.58□□□□□ -1.68
SSX3Q99909 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.58□□□□□ -1.68
SSX3Q99909 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.58□□□□□ -1.68
SSX3Q99909 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms