Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ABCA3Q99758 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
ABCA3Q99758 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
ABCA3Q99758 RPS27AP11-201ENST00000402798 447 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.21□□□□□ -1.42
ABCA3Q99758 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.21□□□□□ -1.42
ABCA3Q99758 DHFRP3-201ENST00000455595 559 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.21□□□□□ -1.42
ABCA3Q99758 TPT1P3-201ENST00000492841 512 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 AC010476.1-201ENST00000519111 851 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.21□□□□□ -1.42
ABCA3Q99758 AC025884.1-201ENST00000556034 378 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.21□□□□□ -1.42
ABCA3Q99758 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.21□□□□□ -1.42
ABCA3Q99758 AC090181.2-201ENST00000602975 672 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 AC023043.4-201ENST00000612081 449 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.21□□□□□ -1.42
ABCA3Q99758 AC090506.2-201ENST00000624521 419 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 MAPK10-372ENST00000641954 3413 ntBASIC6.21□□□□□ -1.42
ABCA3Q99758 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ABCA3Q99758 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
ABCA3Q99758 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.2□□□□□ -1.42
ABCA3Q99758 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ABCA3Q99758 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.2□□□□□ -1.42
ABCA3Q99758 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.2□□□□□ -1.42
ABCA3Q99758 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.2□□□□□ -1.42
ABCA3Q99758 RN7SKP17-201ENST00000411242 351 ntBASIC6.2□□□□□ -1.42
ABCA3Q99758 RPL21P89-201ENST00000444021 467 ntBASIC6.2□□□□□ -1.42
ABCA3Q99758 RN7SL197P-201ENST00000466981 299 ntBASIC6.2□□□□□ -1.42
ABCA3Q99758 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.2□□□□□ -1.42
ABCA3Q99758 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.2□□□□□ -1.42
ABCA3Q99758 OR8A2P-201ENST00000528631 952 ntBASIC6.2□□□□□ -1.42
ABCA3Q99758 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.2□□□□□ -1.42
ABCA3Q99758 AC020634.1-201ENST00000608701 549 ntBASIC6.2□□□□□ -1.42
ABCA3Q99758 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.2□□□□□ -1.42
ABCA3Q99758 AC009120.7-201ENST00000623452 780 ntBASIC6.2□□□□□ -1.42
ABCA3Q99758 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.2□□□□□ -1.42
ABCA3Q99758 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ABCA3Q99758 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ABCA3Q99758 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ABCA3Q99758 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.2□□□□□ -1.42
ABCA3Q99758 AC025031.4-201ENST00000621248 3271 ntBASIC6.2□□□□□ -1.42
ABCA3Q99758 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ABCA3Q99758 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.2□□□□□ -1.42
ABCA3Q99758 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ABCA3Q99758 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ABCA3Q99758 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ABCA3Q99758 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ABCA3Q99758 E2F6P2-201ENST00000420708 748 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.19□□□□□ -1.42
ABCA3Q99758 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.19□□□□□ -1.42
ABCA3Q99758 AGGF1P9-201ENST00000561884 913 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 MIR4286-201ENST00000580651 93 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 MIR3158-1-201ENST00000583596 81 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.19□□□□□ -1.42
ABCA3Q99758 AC073137.1-201ENST00000605636 634 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ABCA3Q99758 AC073365.1-203ENST00000641055 1992 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
ABCA3Q99758 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ABCA3Q99758 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ABCA3Q99758 LARP1BP1-201ENST00000506036 1359 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 AL031119.1-201ENST00000404707 1879 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.19□□□□□ -1.42
ABCA3Q99758 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
ABCA3Q99758 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ABCA3Q99758 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.19□□□□□ -1.42
ABCA3Q99758 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.19□□□□□ -1.42
ABCA3Q99758 AC011998.1-201ENST00000433403 117 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.19□□□□□ -1.42
ABCA3Q99758 MIR2116-201ENST00000517221 80 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.19□□□□□ -1.42
ABCA3Q99758 AC136777.2-201ENST00000522979 358 ntBASIC6.19□□□□□ -1.42
ABCA3Q99758 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.19□□□□□ -1.42
ABCA3Q99758 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.19□□□□□ -1.42
ABCA3Q99758 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.19□□□□□ -1.42
ABCA3Q99758 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.18□□□□□ -1.42
ABCA3Q99758 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ABCA3Q99758 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ABCA3Q99758 AP000580.1-201ENST00000404439 358 ntBASIC6.18□□□□□ -1.42
ABCA3Q99758 H3F3BP1-201ENST00000440551 403 ntBASIC6.18□□□□□ -1.42
ABCA3Q99758 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.18□□□□□ -1.42
ABCA3Q99758 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.18□□□□□ -1.42
ABCA3Q99758 Z95327.3-201ENST00000610385 572 ntBASIC6.18□□□□□ -1.42
ABCA3Q99758 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ABCA3Q99758 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ABCA3Q99758 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ABCA3Q99758 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ABCA3Q99758 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ABCA3Q99758 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms