Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC007497.1-201ENST00000610421 561 ntBASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 Mico1.1-201ENST00000611698 204 ntBASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 AC243960.7-201ENST00000623532 707 ntBASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 AC073869.10-201ENST00000642016 354 ntBASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 ZNF652P1-201ENST00000442420 1309 ntBASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 SMG1P6-201ENST00000532337 2930 ntBASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 AL513548.1-201ENST00000562904 1724 ntBASIC4.92□□□□□ -1.62
ECHDC3Q96DC8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AC132825.1-201ENST00000463573 2247 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 MIR937-201ENST00000401271 86 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 SNORA11B-201ENST00000408175 129 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 RNA5SP113-201ENST00000410486 84 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AC013429.2-201ENST00000418798 781 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AL356981.1-201ENST00000454879 684 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 EIF4A2P5-201ENST00000529914 499 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 MTND2P17-201ENST00000550281 688 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AC093591.2-201ENST00000565254 3843 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AP000919.1-201ENST00000582850 985 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AL031320.1-201ENST00000604177 357 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AL022401.1-201ENST00000619498 108 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 AC073136.1-201ENST00000449426 2884 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 SAMMSON-226ENST00000642089 1582 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 BTBD10P1-201ENST00000549824 1352 ntBASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ECHDC3Q96DC8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
ECHDC3Q96DC8 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 RN7SKP100-201ENST00000411258 284 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC114755.2-201ENST00000413520 361 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC104333.2-201ENST00000422630 192 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AL356390.1-201ENST00000455684 397 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC063943.1-201ENST00000465434 453 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC093890.1-201ENST00000502554 540 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 RNU6-943P-201ENST00000516960 98 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AL391358.1-201ENST00000605342 190 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC091953.3-201ENST00000623220 236 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AP001784.1-201ENST00000624107 428 ntBASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
ECHDC3Q96DC8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 AC104260.2-201ENST00000623551 3497 ntBASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ECHDC3Q96DC8 U3.30-201ENST00000391308 210 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms