Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 AC073111.2-201ENST00000605657 1075 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 AC000068.2-201ENST00000608816 460 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 AP005131.7-201ENST00000610087 611 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 HTR1DP1-201ENST00000616500 888 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 AL133370.2-201ENST00000619934 439 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 AL591926.1-201ENST00000620542 217 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 CU639417.4-201ENST00000623928 207 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 MAPK10-303ENST00000641324 3959 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 AC068446.1-201ENST00000556425 1549 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 CASC19-206ENST00000641028 1430 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 LINC01109-201ENST00000603837 3081 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 DDX18P5-201ENST00000534547 1306 ntBASIC4.2□□□□□ -1.74
CCDC71LQ8N9Z2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC023490.2-201ENST00000359859 470 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 SNORA73.1-201ENST00000363107 205 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 HSPD1P16-201ENST00000402302 394 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 OR4K12P-201ENST00000406538 961 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 MTND3P20-201ENST00000407663 186 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC093155.2-201ENST00000420734 937 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 GAPDHP49-201ENST00000421421 961 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AL158073.1-201ENST00000426848 1104 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 FABP7P2-201ENST00000429946 379 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AL606490.8-201ENST00000441624 319 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 TXNP2-201ENST00000443918 295 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC104339.1-201ENST00000465478 348 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 RPL9P15-201ENST00000491096 532 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC138866.2-201ENST00000508650 584 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 GTF2F2P1-201ENST00000511083 675 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC026616.1-201ENST00000523157 525 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC090819.1-201ENST00000523800 1111 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC005868.1-201ENST00000536421 331 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC125612.1-201ENST00000547580 377 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC068446.3-201ENST00000555285 382 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC005726.4-201ENST00000582858 458 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 RNF138P2-201ENST00000603490 592 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 AC090948.2-201ENST00000607363 564 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 WBP1LP8-201ENST00000617401 327 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 MIR6813-201ENST00000621638 56 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 BRAFP1-201ENST00000445336 2703 ntBASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC71LQ8N9Z2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 OR13C1P-202ENST00000641378 2919 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 DHX9P1-201ENST00000436565 3076 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 RNU6-984P-201ENST00000363236 109 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 RN7SKP171-201ENST00000364417 303 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 MT-RNR1-201ENST00000389680 954 ntBASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC71LQ8N9Z2 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms