Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 GABARAPL3-201ENST00000412799 354 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC104333.2-201ENST00000422630 192 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 RANP1-206ENST00000455094 651 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 RNA5SP103-201ENST00000459503 118 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC084754.1-201ENST00000463466 464 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC006427.1-201ENST00000514359 712 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 PSMA6P4-201ENST00000603247 718 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 MIR6778-201ENST00000617912 73 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC074101.1-201ENST00000637861 241 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC009229.4-201ENST00000623854 1947 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPH1Q70E73 AC011447.7-201ENST00000624228 1590 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC006210.2-201ENST00000367074 1545 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 MIR92A2-201ENST00000385299 75 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 DPY19L1P2-201ENST00000426647 915 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AL158073.1-201ENST00000426848 1104 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 RPL12P46-201ENST00000436610 195 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC023512.1-201ENST00000444513 499 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 RPS6P2-201ENST00000454208 705 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC005229.2-201ENST00000456995 399 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 APOOP2-201ENST00000461561 539 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC027544.3-201ENST00000535082 757 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC008083.2-201ENST00000546707 476 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC067805.1-201ENST00000559344 470 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC090312.1-201ENST00000580637 348 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC133552.5-201ENST00000604266 540 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 BNIP3P35-201ENST00000604530 490 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AL133406.3-201ENST00000606817 541 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC010245.2-201ENST00000606908 1167 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC090948.2-201ENST00000607363 564 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC009032.1-201ENST00000617574 431 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC009704.2-201ENST00000618739 483 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AC074276.2-201ENST00000619891 348 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 AL359742.1-201ENST00000622497 540 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AL691477.1-201ENST00000624398 162 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 MIR1910-201ENST00000636955 80 ntBASIC5.19□□□□□ -1.58
RAPH1Q70E73 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAPH1Q70E73 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.19□□□□□ -1.58
RAPH1Q70E73 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAPH1Q70E73 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.18□□□□□ -1.58
RAPH1Q70E73 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RAPH1Q70E73 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.18□□□□□ -1.58
RAPH1Q70E73 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RAPH1Q70E73 OR55B1P-203ENST00000641518 2602 ntBASIC5.18□□□□□ -1.58
RAPH1Q70E73 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAPH1Q70E73 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAPH1Q70E73 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RAPH1Q70E73 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAPH1Q70E73 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.18□□□□□ -1.58
RAPH1Q70E73 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.18□□□□□ -1.58
RAPH1Q70E73 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.18□□□□□ -1.58
RAPH1Q70E73 RNA5SP234-201ENST00000363916 119 ntBASIC5.18□□□□□ -1.58
RAPH1Q70E73 AC083799.1-201ENST00000366451 910 ntBASIC5.18□□□□□ -1.58
RAPH1Q70E73 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms