Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 BNIP3P1-201ENST00000547295 580 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 NDUFB4P11-201ENST00000560510 395 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 AC010615.3-201ENST00000597319 394 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 AC119501.1-201ENST00000603646 475 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 AC100827.5-201ENST00000615883 426 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 BX005214.3-202ENST00000619809 325 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 AC091953.3-201ENST00000623220 236 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 AC133552.1-201ENST00000569988 4007 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
RFWD3Q6PCD5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL021331.1-201ENST00000402817 582 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL691482.1-201ENST00000453255 87 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 RNU7-157P-201ENST00000459600 66 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL591473.1-201ENST00000464297 313 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AC105233.1-201ENST00000498840 781 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 MORF4L1P3-201ENST00000525966 950 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL358913.1-201ENST00000554342 121 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 MIR4480-201ENST00000582492 71 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AL031320.1-201ENST00000604177 357 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AC074140.1-201ENST00000621617 208 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 AC007342.9-201ENST00000623877 1385 ntBASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RFWD3Q6PCD5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 MIR585-201ENST00000384887 94 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 LRRC37BP1-201ENST00000398851 714 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AC007738.1-201ENST00000413892 348 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 RBMY2KP-201ENST00000418221 992 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AC012519.1-201ENST00000424588 610 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 UBE2V2P3-201ENST00000433562 437 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AL450023.3-201ENST00000440592 271 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 IGLV2-34-201ENST00000490007 283 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 RN7SL441P-201ENST00000492388 296 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 BTG4P1-201ENST00000510421 183 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 RNU6-751P-201ENST00000516382 101 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AC009117.1-201ENST00000563948 554 ntBASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RFWD3Q6PCD5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 322.5 ms