Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 HMGB1P47-201ENST00000511281 589 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 IGKV2D-10-201ENST00000520194 281 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 OR4A43P-201ENST00000532938 908 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AL358913.1-201ENST00000554342 121 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 MIR4284-201ENST00000578924 81 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 MIMT1-201ENST00000597105 1050 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AL135786.2-201ENST00000608422 615 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AP001521.2-201ENST00000608772 546 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC019193.2-201ENST00000610012 634 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC020633.1-201ENST00000468439 2247 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 AC015813.6-201ENST00000624409 5808 ntBASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.05□□□□□ -1.6
LYSMD4Q5XG99 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 RPL10P10-201ENST00000403509 664 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC092651.1-201ENST00000426110 312 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 MTND4LP14-201ENST00000429447 288 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 HMGB3P10-201ENST00000434734 572 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 REG1CP-206ENST00000447469 496 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 OR1H1P-201ENST00000448731 937 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 RN7SL443P-201ENST00000464331 290 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC020779.1-201ENST00000478757 796 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 GLUD1P3-202ENST00000508551 200 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC108157.1-201ENST00000510511 539 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 FABP5P6-201ENST00000510588 409 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC104687.2-201ENST00000604442 342 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 LSM1P2-201ENST00000604911 322 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AL031658.2-201ENST00000616850 651 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 AC232271.1-201ENST00000602455 2715 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 MTND4P21-201ENST00000453886 1357 ntBASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.04□□□□□ -1.6
LYSMD4Q5XG99 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 RPL32P3-201ENST00000359025 275 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 MIR589-201ENST00000385238 99 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 MIR298-201ENST00000401212 88 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 FAR1P1-201ENST00000427163 934 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 MTND4LP7-201ENST00000431728 294 ntBASIC5.03□□□□□ -1.6
LYSMD4Q5XG99 AC012512.1-201ENST00000446594 718 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms