Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
CDC42BPAQ5VT25 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
CDC42BPAQ5VT25 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 H2AFZP5-201ENST00000446960 382 ntBASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 AC091167.1-201ENST00000492017 396 ntBASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 AC106806.2-201ENST00000509365 500 ntBASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 BNIP3P5-201ENST00000562290 498 ntBASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 CYCSP40-201ENST00000575927 294 ntBASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 ASNSP1-204ENST00000641977 1664 ntBASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 AC005831.1-201ENST00000624384 1697 ntBASIC7.02□□□□□ -1.29
CDC42BPAQ5VT25 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 MIR383-201ENST00000362257 73 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 OR8G2P-201ENST00000412796 908 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 E2F6P2-201ENST00000420708 748 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 CYCSP24-201ENST00000445119 316 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 DHFRP3-201ENST00000455595 559 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 AC128716.1-201ENST00000475129 166 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 AC007224.1-201ENST00000564410 144 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 ADAM5-202ENST00000399789 1942 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 NDUFA5P1-201ENST00000433858 341 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 EEF1A1P1-201ENST00000447052 739 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 AC007537.2-201ENST00000472093 511 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 AL020997.2-201ENST00000602607 184 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 AC020634.1-201ENST00000608701 549 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 AC024941.1-201ENST00000612250 334 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 MIR6891-201ENST00000618788 93 ntBASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDC42BPAQ5VT25 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 SAMM50P1-201ENST00000455403 1399 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 SNORA37-201ENST00000384504 129 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 AC007738.1-201ENST00000413892 348 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 RN7SL691P-201ENST00000494487 301 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 IGKV3OR22-2-201ENST00000517943 313 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 IGHVIII-2-1-201ENST00000518843 291 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 FKBP1BP1-201ENST00000553366 325 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 RN7SL176P-201ENST00000580352 264 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 CPHL1P-201ENST00000461341 3407 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 MFSD8-220ENST00000641243 1422 ntBASIC7□□□□□ -1.29
CDC42BPAQ5VT25 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7□□□□□ -1.29
CDC42BPAQ5VT25 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 RNA5SP366-201ENST00000365454 123 ntBASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 AC093166.2-201ENST00000455969 1017 ntBASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 AC091153.1-201ENST00000466297 402 ntBASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 AC006349.1-201ENST00000555526 235 ntBASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 AC015914.2-201ENST00000618167 288 ntBASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 AL023881.1-201ENST00000621088 301 ntBASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDC42BPAQ5VT25 AC104118.1-201ENST00000607625 1589 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms