Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 THAP12P8-201ENST00000447914 2115 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RFX4Q33E94 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX4Q33E94 RNU6-729P-201ENST00000384399 107 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 MIR195-201ENST00000385194 87 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 SNORD96B-201ENST00000386148 79 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 ATP5HP3-201ENST00000396994 486 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 SNORA77-201ENST00000408716 125 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 AL513325.1-201ENST00000417716 1034 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 AL450263.2-201ENST00000439400 589 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.56□□□□□ -1.68
RFX4Q33E94 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 RN7SL41P-201ENST00000476144 297 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 AC117394.1-201ENST00000477323 567 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 RN7SL184P-201ENST00000488308 297 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 CYCSP28-201ENST00000534284 321 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 AC024940.3-201ENST00000538551 316 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.56□□□□□ -1.68
RFX4Q33E94 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 SNORD95-201ENST00000579879 68 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX4Q33E94 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX4Q33E94 AC109309.2-201ENST00000612597 332 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 AL049794.2-201ENST00000616301 365 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 AC012414.7-202ENST00000622705 1090 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX4Q33E94 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 EOGT-210ENST00000615922 1931 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.56□□□□□ -1.68
RFX4Q33E94 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX4Q33E94 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFX4Q33E94 AC233968.1-201ENST00000611212 1300 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RFX4Q33E94 MIR323A-201ENST00000362199 86 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 RNA5SP242-201ENST00000364171 118 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 AL672167.2-201ENST00000377164 879 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RFX4Q33E94 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.55□□□□□ -1.68
RFX4Q33E94 RPL7L1P9-201ENST00000431298 745 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.55□□□□□ -1.68
RFX4Q33E94 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.55□□□□□ -1.68
RFX4Q33E94 MTCO3P17-201ENST00000443775 513 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 AC104651.2-201ENST00000447549 528 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 AC007386.1-201ENST00000455212 582 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 SETP20-201ENST00000457046 852 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.55□□□□□ -1.68
RFX4Q33E94 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 RPL23AP37-201ENST00000479658 549 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 AGGF1P3-201ENST00000493675 1213 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 MTCO3P42-201ENST00000509488 518 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 MTCO3P39-201ENST00000514812 518 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 RNA5SP360-201ENST00000516555 118 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 AC134698.5-201ENST00000519444 336 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.55□□□□□ -1.68
RFX4Q33E94 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 MIR4675-201ENST00000577898 77 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.55□□□□□ -1.68
RFX4Q33E94 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 COX6CP4-201ENST00000605798 228 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX4Q33E94 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.55□□□□□ -1.68
RFX4Q33E94 AC005086.4-201ENST00000623065 213 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFX4Q33E94 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFX4Q33E94 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX4Q33E94 PANDAR-201ENST00000629595 1506 ntBASIC4.55□□□□□ -1.68
RFX4Q33E94 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFX4Q33E94 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.55□□□□□ -1.68
RFX4Q33E94 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms