Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH13P55290 RN7SL547P-201ENST00000490793 290 ntBASIC5.05□□□□□ -1.6
CDH13P55290 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH13P55290 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH13P55290 RNU6-1102P-201ENST00000516149 96 ntBASIC5.05□□□□□ -1.6
CDH13P55290 VTA1P2-201ENST00000520205 911 ntBASIC5.05□□□□□ -1.6
CDH13P55290 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH13P55290 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH13P55290 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH13P55290 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH13P55290 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH13P55290 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH13P55290 AC090079.2-201ENST00000575289 768 ntBASIC5.05□□□□□ -1.6
CDH13P55290 MIR4472-2-201ENST00000582069 67 ntBASIC5.05□□□□□ -1.6
CDH13P55290 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH13P55290 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH13P55290 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH13P55290 AC006272.2-201ENST00000594725 163 ntBASIC5.05□□□□□ -1.6
CDH13P55290 AL122125.1-201ENST00000616999 600 ntBASIC5.05□□□□□ -1.6
CDH13P55290 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.05□□□□□ -1.6
CDH13P55290 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH13P55290 CYP4F35P-202ENST00000636121 390 ntBASIC5.05□□□□□ -1.6
CDH13P55290 BRAFP1-201ENST00000445336 2703 ntBASIC5.05□□□□□ -1.6
CDH13P55290 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH13P55290 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH13P55290 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH13P55290 AC007996.1-201ENST00000620414 2821 ntBASIC5.05□□□□□ -1.6
CDH13P55290 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH13P55290 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CDH13P55290 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH13P55290 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH13P55290 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 AC093591.2-201ENST00000565254 3843 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AL731532.2-201ENST00000623542 1953 ntBASIC5.04□□□□□ -1.6
CDH13P55290 SMG1P4-204ENST00000523028 4131 ntBASIC5.04□□□□□ -1.6
CDH13P55290 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 RNU6-650P-201ENST00000365658 111 ntBASIC5.04□□□□□ -1.6
CDH13P55290 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 RNU4-31P-201ENST00000384211 141 ntBASIC5.04□□□□□ -1.6
CDH13P55290 RNA5SP339-201ENST00000390987 122 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AL031985.1-201ENST00000392713 418 ntBASIC5.04□□□□□ -1.6
CDH13P55290 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.04□□□□□ -1.6
CDH13P55290 MIR1282-201ENST00000408865 101 ntBASIC5.04□□□□□ -1.6
CDH13P55290 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH13P55290 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH13P55290 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH13P55290 AC009238.2-201ENST00000431026 355 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH13P55290 RPS29P10-201ENST00000439197 166 ntBASIC5.04□□□□□ -1.6
CDH13P55290 RPS11P7-201ENST00000442125 465 ntBASIC5.04□□□□□ -1.6
CDH13P55290 RPL7AP61-201ENST00000443410 636 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AL035551.1-201ENST00000446931 348 ntBASIC5.04□□□□□ -1.6
CDH13P55290 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH13P55290 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.04□□□□□ -1.6
CDH13P55290 RPS27AP2-201ENST00000457576 465 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC078857.1-201ENST00000469870 667 ntBASIC5.04□□□□□ -1.6
CDH13P55290 NPM1P29-201ENST00000483112 803 ntBASIC5.04□□□□□ -1.6
CDH13P55290 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH13P55290 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH13P55290 RN7SL447P-201ENST00000494711 245 ntBASIC5.04□□□□□ -1.6
CDH13P55290 RN7SL466P-201ENST00000497546 295 ntBASIC5.04□□□□□ -1.6
CDH13P55290 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH13P55290 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH13P55290 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH13P55290 RNU6-1308P-201ENST00000516817 103 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH13P55290 AC018442.3-201ENST00000523025 183 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH13P55290 EIF4A2P5-201ENST00000529914 499 ntBASIC5.04□□□□□ -1.6
CDH13P55290 NPM1P35-201ENST00000533043 868 ntBASIC5.04□□□□□ -1.6
CDH13P55290 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH13P55290 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC126177.5-201ENST00000549599 178 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC127381.1-201ENST00000555979 939 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC025918.2-201ENST00000558683 763 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH13P55290 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH13P55290 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 AC020978.7-201ENST00000575953 1187 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 AC098483.2-201ENST00000603158 454 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC073137.1-201ENST00000605636 634 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AP001033.2-201ENST00000609701 1003 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AL359513.1-201ENST00000614364 557 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC097460.3-201ENST00000623099 442 ntBASIC5.04□□□□□ -1.6
CDH13P55290 AC145207.9-201ENST00000623802 325 ntBASIC5.04□□□□□ -1.6
CDH13P55290 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH13P55290 AC074101.1-201ENST00000637861 241 ntBASIC5.04□□□□□ -1.6
CDH13P55290 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms