Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SNORA43.3-201ENST00000517240 103 ntBASIC5.02□□□□□ -1.61
CDH12P55289 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH12P55289 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH12P55289 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH12P55289 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 IGBP1P1-201ENST00000554337 1009 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH12P55289 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 AC127024.5-201ENST00000580085 462 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH12P55289 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 AC093424.1-201ENST00000604999 338 ntBASIC5.02□□□□□ -1.61
CDH12P55289 FAM72A-208ENST00000607379 1139 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AC244107.2-201ENST00000611773 76 ntBASIC5.02□□□□□ -1.61
CDH12P55289 BNIP3P41-202ENST00000616656 861 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH12P55289 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH12P55289 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH12P55289 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 AC104623.2-202ENST00000623477 4002 ntBASIC5.01□□□□□ -1.61
CDH12P55289 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 AC114786.1-201ENST00000512892 1415 ntBASIC5.01□□□□□ -1.61
CDH12P55289 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CDH12P55289 MIR551A-201ENST00000385042 96 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AL603865.2-201ENST00000401679 213 ntBASIC5.01□□□□□ -1.61
CDH12P55289 RPL21P67-201ENST00000402896 478 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AP002530.1-201ENST00000405705 684 ntBASIC5.01□□□□□ -1.61
CDH12P55289 GTF2IP5-201ENST00000414608 731 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
CDH12P55289 NANOGP5-201ENST00000424456 877 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AKR1B10P1-201ENST00000425765 942 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AL662874.1-201ENST00000426065 230 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 AC000041.1-201ENST00000439655 175 ntBASIC5.01□□□□□ -1.61
CDH12P55289 TCEA1P3-201ENST00000443005 880 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH12P55289 AL445665.1-202ENST00000452436 324 ntBASIC5.01□□□□□ -1.61
CDH12P55289 VDAC2P4-201ENST00000452925 711 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AC008280.2-201ENST00000455473 307 ntBASIC5.01□□□□□ -1.61
CDH12P55289 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 AC020898.1-201ENST00000474167 787 ntBASIC5.01□□□□□ -1.61
CDH12P55289 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 OR11I1P-201ENST00000486033 954 ntBASIC5.01□□□□□ -1.61
CDH12P55289 RPS12P31-201ENST00000491419 398 ntBASIC5.01□□□□□ -1.61
CDH12P55289 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 AC109464.1-201ENST00000511091 819 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 EIF3KP3-201ENST00000514461 639 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 OR8K4P-201ENST00000534608 872 ntBASIC5.01□□□□□ -1.61
CDH12P55289 NANOGNBP2-201ENST00000544753 553 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AP003717.3-201ENST00000544832 1180 ntBASIC5.01□□□□□ -1.61
CDH12P55289 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 AC079600.1-201ENST00000550326 297 ntBASIC5.01□□□□□ -1.61
CDH12P55289 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH12P55289 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
CDH12P55289 AC107958.1-201ENST00000556576 290 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH12P55289 MTCYBP23-201ENST00000558717 1102 ntBASIC5.01□□□□□ -1.61
CDH12P55289 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH12P55289 AC090888.2-201ENST00000559765 1144 ntBASIC5.01□□□□□ -1.61
CDH12P55289 MRPS21P7-201ENST00000566937 238 ntBASIC5.01□□□□□ -1.61
CDH12P55289 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 AL499605.1-201ENST00000604628 403 ntBASIC5.01□□□□□ -1.61
CDH12P55289 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 AC099654.6-201ENST00000636487 512 ntBASIC5.01□□□□□ -1.61
CDH12P55289 MIR193BHG-214ENST00000641765 509 ntBASIC5.01□□□□□ -1.61
CDH12P55289 MAPK10-338ENST00000641647 3362 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms