Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 OR7H2P-201ENST00000513483 306 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 AC016550.3-201ENST00000515706 767 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCN3P51790 EDDM3DP-201ENST00000554692 434 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCN3P51790 AC019322.1-201ENST00000571869 389 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 AL671309.1-201ENST00000603750 544 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 AC067838.1-201ENST00000606064 577 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 AC015722.2-201ENST00000622210 551 ntBASIC5.56□□□□□ -1.52
CLCN3P51790 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCN3P51790 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCN3P51790 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCN3P51790 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCN3P51790 AL512283.1-201ENST00000606756 1384 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
CLCN3P51790 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCN3P51790 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCN3P51790 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCN3P51790 SNORA48.4-201ENST00000391089 134 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 Z97832.1-201ENST00000402490 328 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 NPM1P37-201ENST00000403105 874 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 GPS2P1-201ENST00000411761 986 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 AL357078.2-201ENST00000416486 427 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 HSFY1P1-201ENST00000423928 1178 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCN3P51790 AC007563.3-201ENST00000433233 371 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 NPM1P18-201ENST00000434232 732 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 MTND6P32-201ENST00000457611 483 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 AC063943.1-201ENST00000465434 453 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCN3P51790 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.55□□□□□ -1.52
CLCN3P51790 MTND1P36-201ENST00000522384 936 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 AC012339.2-201ENST00000523996 453 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCN3P51790 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCN3P51790 AC027176.2-201ENST00000559166 746 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 AC022884.2-201ENST00000578535 580 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCN3P51790 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 AC005377.1-201ENST00000605126 456 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 AC097372.4-201ENST00000625025 466 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.55□□□□□ -1.52
CLCN3P51790 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCN3P51790 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCN3P51790 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCN3P51790 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCN3P51790 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CLCN3P51790 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCN3P51790 AC017002.4-201ENST00000604721 1525 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCN3P51790 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCN3P51790 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCN3P51790 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCN3P51790 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCN3P51790 RN7SKP115-201ENST00000363177 317 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CLCN3P51790 RNA5SP87-201ENST00000384155 118 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AL035079.1-201ENST00000405210 287 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 RN7SKP216-201ENST00000411050 312 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCN3P51790 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AC093414.1-201ENST00000434712 514 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCN3P51790 MTND2P39-201ENST00000457230 764 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 MTND3P3-201ENST00000505004 126 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCN3P51790 AL671862.1-201ENST00000515851 349 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.54□□□□□ -1.52
CLCN3P51790 AC067904.2-201ENST00000517322 1283 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCN3P51790 MORF4L1P3-201ENST00000525966 950 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AP003049.1-201ENST00000529418 457 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCN3P51790 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCN3P51790 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.54□□□□□ -1.52
CLCN3P51790 AC135803.1-201ENST00000608748 565 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 MIR6820-201ENST00000611508 62 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AC108359.1-201ENST00000616451 1211 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCN3P51790 AC079298.2-201ENST00000623885 459 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AC019080.5-201ENST00000624891 757 ntBASIC5.54□□□□□ -1.52
CLCN3P51790 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCN3P51790 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms