Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SMARCA4P51532 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SMARCA4P51532 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SMARCA4P51532 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SMARCA4P51532 RNU1-94P-201ENST00000362627 173 ntBASIC8.32□□□□□ -1.08
SMARCA4P51532 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SMARCA4P51532 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC8.32□□□□□ -1.08
SMARCA4P51532 AC090142.1-201ENST00000465776 462 ntBASIC8.32□□□□□ -1.08
SMARCA4P51532 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC8.32□□□□□ -1.08
SMARCA4P51532 AC023043.4-201ENST00000612081 449 ntBASIC8.32□□□□□ -1.08
SMARCA4P51532 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.32□□□□□ -1.08
SMARCA4P51532 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SMARCA4P51532 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
SMARCA4P51532 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SMARCA4P51532 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC8.32□□□□□ -1.08
SMARCA4P51532 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
SMARCA4P51532 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC8.32□□□□□ -1.08
SMARCA4P51532 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
SMARCA4P51532 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SMARCA4P51532 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
SMARCA4P51532 AC079777.1-201ENST00000623836 1953 ntBASIC8.32□□□□□ -1.08
SMARCA4P51532 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SMARCA4P51532 AC092162.1-201ENST00000432828 434 ntBASIC8.32□□□□□ -1.08
SMARCA4P51532 RRM2P4-201ENST00000441721 562 ntBASIC8.32□□□□□ -1.08
SMARCA4P51532 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC8.32□□□□□ -1.08
SMARCA4P51532 IGKV1OR2-118-201ENST00000603238 347 ntBASIC8.32□□□□□ -1.08
SMARCA4P51532 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SMARCA4P51532 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SMARCA4P51532 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC8.31□□□□□ -1.08
SMARCA4P51532 EIF2AP4-201ENST00000424793 1781 ntBASIC8.31□□□□□ -1.08
SMARCA4P51532 AC073365.1-203ENST00000641055 1992 ntBASIC8.31□□□□□ -1.08
SMARCA4P51532 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SMARCA4P51532 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC8.31□□□□□ -1.08
SMARCA4P51532 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC8.31□□□□□ -1.08
SMARCA4P51532 FTO-203ENST00000460382 1517 ntTSL 5 BASIC8.31□□□□□ -1.08
SMARCA4P51532 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SMARCA4P51532 SDHCP2-201ENST00000398565 501 ntBASIC8.31□□□□□ -1.08
SMARCA4P51532 NFYAP1-201ENST00000431953 972 ntBASIC8.31□□□□□ -1.08
SMARCA4P51532 AC105137.1-201ENST00000484355 562 ntBASIC8.31□□□□□ -1.08
SMARCA4P51532 RN7SL691P-201ENST00000494487 301 ntBASIC8.31□□□□□ -1.08
SMARCA4P51532 MIR2116-201ENST00000517221 80 ntBASIC8.31□□□□□ -1.08
SMARCA4P51532 AC009120.7-201ENST00000623452 780 ntBASIC8.31□□□□□ -1.08
SMARCA4P51532 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SMARCA4P51532 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC8.31□□□□□ -1.08
SMARCA4P51532 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SMARCA4P51532 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SMARCA4P51532 E2F6P2-201ENST00000420708 748 ntBASIC8.3□□□□□ -1.08
SMARCA4P51532 AC006946.1-201ENST00000429106 328 ntBASIC8.3□□□□□ -1.08
SMARCA4P51532 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC8.3□□□□□ -1.08
SMARCA4P51532 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SMARCA4P51532 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SMARCA4P51532 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SMARCA4P51532 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SMARCA4P51532 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC8.3□□□□□ -1.08
SMARCA4P51532 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SMARCA4P51532 OR51H2P-202ENST00000641424 3046 ntBASIC8.3□□□□□ -1.08
SMARCA4P51532 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SMARCA4P51532 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SMARCA4P51532 SPRR2C-201ENST00000290702 219 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 MIR208A-201ENST00000362287 71 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC8.29□□□□□ -1.08
SMARCA4P51532 AL356095.1-201ENST00000417217 199 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 TMBIM7P-201ENST00000418074 855 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC8.29□□□□□ -1.08
SMARCA4P51532 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SMARCA4P51532 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC8.29□□□□□ -1.08
SMARCA4P51532 TBCA-207ENST00000520039 157 ntTSL 3 BASIC8.29□□□□□ -1.08
SMARCA4P51532 AC099676.1-201ENST00000608886 657 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC8.29□□□□□ -1.08
SMARCA4P51532 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.29□□□□□ -1.08
SMARCA4P51532 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8.29□□□□□ -1.08
SMARCA4P51532 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 AP000580.1-201ENST00000404439 358 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC8.29□□□□□ -1.08
SMARCA4P51532 COX6CP15-201ENST00000426313 211 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 OR52E3P-201ENST00000452083 936 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 SNORA31.9-201ENST00000516429 84 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 PSMB7P1-201ENST00000556349 514 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.29□□□□□ -1.08
SMARCA4P51532 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC8.29□□□□□ -1.08
SMARCA4P51532 AC020634.1-201ENST00000608701 549 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 AC011815.3-201ENST00000624194 473 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA4P51532 LCMT1-AS2-202ENST00000565214 5666 ntBASIC8.29□□□□□ -1.08
SMARCA4P51532 CYP1D1P-201ENST00000416662 1433 ntBASIC8.28□□□□□ -1.08
SMARCA4P51532 Z95114.1-201ENST00000624264 14574 ntBASIC8.28□□□□□ -1.08
SMARCA4P51532 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA4P51532 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA4P51532 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA4P51532 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SMARCA4P51532 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA4P51532 NLN-202ENST00000502464 8354 ntTSL 5 BASIC8.28□□□□□ -1.08
SMARCA4P51532 AC005261.4-201ENST00000600047 1385 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms