Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP000919.1-202ENST00000581139 1264 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.56□□□□□ -1.36
MRE11P49959 AC091304.6-201ENST00000619761 202 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AL121594.5-201ENST00000631724 573 ntBASIC6.56□□□□□ -1.36
MRE11P49959 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
MRE11P49959 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
MRE11P49959 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
MRE11P49959 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.56□□□□□ -1.36
MRE11P49959 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.56□□□□□ -1.36
MRE11P49959 AC079097.1-201ENST00000512187 1399 ntBASIC6.56□□□□□ -1.36
MRE11P49959 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 RNU4-28P-201ENST00000364739 141 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 RN7SKP125-201ENST00000410481 302 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AL096829.1-201ENST00000413677 457 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.55□□□□□ -1.36
MRE11P49959 RPL22P18-201ENST00000417197 377 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AL807761.1-201ENST00000417622 171 ntBASIC6.55□□□□□ -1.36
MRE11P49959 MTCO3P4-201ENST00000419236 787 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.55□□□□□ -1.36
MRE11P49959 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.55□□□□□ -1.36
MRE11P49959 PCBP2P1-201ENST00000437262 977 ntBASIC6.55□□□□□ -1.36
MRE11P49959 RPS12P17-201ENST00000438591 377 ntBASIC6.55□□□□□ -1.36
MRE11P49959 Z99127.2-201ENST00000441426 334 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 AP006222.1-205ENST00000450734 457 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AZGP1P2-201ENST00000454506 345 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 TPTE2P5-203ENST00000458118 728 ntBASIC6.55□□□□□ -1.36
MRE11P49959 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.55□□□□□ -1.36
MRE11P49959 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 RPS7P6-201ENST00000485777 579 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC006499.3-201ENST00000506077 748 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC016559.2-201ENST00000510759 359 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 AP003396.4-201ENST00000527574 265 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC036111.2-201ENST00000533247 901 ntBASIC6.55□□□□□ -1.36
MRE11P49959 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 AC008055.1-201ENST00000547032 609 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 AC009097.3-201ENST00000563557 1018 ntBASIC6.55□□□□□ -1.36
MRE11P49959 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.55□□□□□ -1.36
MRE11P49959 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.55□□□□□ -1.36
MRE11P49959 ZNF92P3-201ENST00000596594 954 ntBASIC6.55□□□□□ -1.36
MRE11P49959 HMGB1P51-201ENST00000605166 638 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC096861.1-201ENST00000616652 240 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC091932.2-201ENST00000623014 291 ntBASIC6.55□□□□□ -1.36
MRE11P49959 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.55□□□□□ -1.36
MRE11P49959 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.55□□□□□ -1.36
MRE11P49959 AC104260.2-201ENST00000623551 3497 ntBASIC6.55□□□□□ -1.36
MRE11P49959 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MRE11P49959 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 OR4F13P-202ENST00000560066 2054 ntBASIC6.54□□□□□ -1.36
MRE11P49959 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.54□□□□□ -1.36
MRE11P49959 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC235565.1-201ENST00000456962 1325 ntBASIC6.54□□□□□ -1.36
MRE11P49959 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 AC112255.1-201ENST00000624070 2493 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AP004607.3-201ENST00000530354 3915 ntBASIC6.54□□□□□ -1.36
MRE11P49959 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 AC119674.1-202ENST00000641333 1860 ntBASIC6.54□□□□□ -1.36
MRE11P49959 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
MRE11P49959 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.54□□□□□ -1.36
MRE11P49959 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
MRE11P49959 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 RNA5SP346-201ENST00000363541 121 ntBASIC6.54□□□□□ -1.36
MRE11P49959 SNORD116-8-201ENST00000384365 95 ntBASIC6.54□□□□□ -1.36
MRE11P49959 HMGB3P19-201ENST00000403971 560 ntBASIC6.54□□□□□ -1.36
MRE11P49959 RPL5P19-201ENST00000404228 893 ntBASIC6.54□□□□□ -1.36
MRE11P49959 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MRE11P49959 NPM1P4-201ENST00000414095 812 ntBASIC6.54□□□□□ -1.36
MRE11P49959 COX5BP7-201ENST00000414780 274 ntBASIC6.54□□□□□ -1.36
MRE11P49959 KRR1P1-201ENST00000419430 803 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AC010099.3-201ENST00000423896 409 ntBASIC6.54□□□□□ -1.36
MRE11P49959 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.54□□□□□ -1.36
MRE11P49959 BX119321.1-201ENST00000428912 797 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.54□□□□□ -1.36
MRE11P49959 MTND4P32-201ENST00000437189 1237 ntBASIC6.54□□□□□ -1.36
MRE11P49959 EMC3-AS1-205ENST00000438698 534 ntBASIC6.54□□□□□ -1.36
MRE11P49959 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.54□□□□□ -1.36
MRE11P49959 HMGB1P26-201ENST00000452520 628 ntBASIC6.54□□□□□ -1.36
MRE11P49959 MEMO1P4-201ENST00000453590 386 ntBASIC6.54□□□□□ -1.36
MRE11P49959 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms