Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX1P48742 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX1P48742 MRPS33P4-201ENST00000434892 317 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AL772161.1-201ENST00000439130 476 ntBASIC5.31□□□□□ -1.56
LHX1P48742 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX1P48742 AL450023.3-201ENST00000440592 271 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AL500527.1-201ENST00000448532 255 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX1P48742 AC239798.3-201ENST00000454459 408 ntBASIC5.31□□□□□ -1.56
LHX1P48742 RPS3AP41-201ENST00000462701 778 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AC098583.1-201ENST00000480875 255 ntBASIC5.31□□□□□ -1.56
LHX1P48742 GAPDHP56-201ENST00000506031 988 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.31□□□□□ -1.56
LHX1P48742 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.31□□□□□ -1.56
LHX1P48742 AC021006.3-201ENST00000530771 192 ntBASIC5.31□□□□□ -1.56
LHX1P48742 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX1P48742 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.31□□□□□ -1.56
LHX1P48742 AC008126.1-201ENST00000549019 480 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AL731537.2-201ENST00000561565 951 ntBASIC5.31□□□□□ -1.56
LHX1P48742 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX1P48742 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.31□□□□□ -1.56
LHX1P48742 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.31□□□□□ -1.56
LHX1P48742 BNIP3P32-201ENST00000600015 554 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AC007620.3-201ENST00000608131 497 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LHX1P48742 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX1P48742 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LHX1P48742 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LHX1P48742 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LHX1P48742 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LHX1P48742 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LHX1P48742 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LHX1P48742 LRRC37BP1-201ENST00000398851 714 ntBASIC5.3□□□□□ -1.56
LHX1P48742 MIR937-201ENST00000401271 86 ntBASIC5.3□□□□□ -1.56
LHX1P48742 RPL21P67-201ENST00000402896 478 ntBASIC5.3□□□□□ -1.56
LHX1P48742 U3.32-201ENST00000408116 212 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 RBMY2KP-201ENST00000418221 992 ntBASIC5.3□□□□□ -1.56
LHX1P48742 MGAT2P2-201ENST00000427194 797 ntBASIC5.3□□□□□ -1.56
LHX1P48742 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.3□□□□□ -1.56
LHX1P48742 RPS3AP53-201ENST00000454716 778 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.3□□□□□ -1.56
LHX1P48742 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.3□□□□□ -1.56
LHX1P48742 AC104629.2-201ENST00000468627 598 ntBASIC5.3□□□□□ -1.56
LHX1P48742 MRPS33P2-201ENST00000507850 322 ntBASIC5.3□□□□□ -1.56
LHX1P48742 BTF3P13-201ENST00000513224 490 ntBASIC5.3□□□□□ -1.56
LHX1P48742 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 AC006349.1-201ENST00000555526 235 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 BGLT3-201ENST00000564523 994 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AC027216.1-201ENST00000577726 685 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.3□□□□□ -1.56
LHX1P48742 AC005520.3-201ENST00000602874 370 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AL049794.2-201ENST00000616301 365 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AC087385.3-201ENST00000620477 187 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AC015722.2-201ENST00000622210 551 ntBASIC5.3□□□□□ -1.56
LHX1P48742 LINC00216-201ENST00000623548 1126 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.3□□□□□ -1.56
LHX1P48742 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
LHX1P48742 AL163152.1-201ENST00000642001 374 ntBASIC5.3□□□□□ -1.56
LHX1P48742 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
LHX1P48742 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
LHX1P48742 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LHX1P48742 AC068870.3-201ENST00000625077 2536 ntBASIC5.3□□□□□ -1.56
LHX1P48742 AC073429.2-201ENST00000569694 1444 ntBASIC5.3□□□□□ -1.56
LHX1P48742 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LHX1P48742 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LHX1P48742 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LHX1P48742 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LHX1P48742 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 AC097063.1-201ENST00000426714 1797 ntBASIC5.29□□□□□ -1.56
LHX1P48742 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.29□□□□□ -1.56
LHX1P48742 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 AC099654.2-201ENST00000433031 1980 ntBASIC5.29□□□□□ -1.56
LHX1P48742 IRF5P1-201ENST00000504852 2164 ntBASIC5.29□□□□□ -1.56
LHX1P48742 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LHX1P48742 AC053481.2-202ENST00000582394 1500 ntBASIC5.29□□□□□ -1.56
LHX1P48742 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LHX1P48742 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.29□□□□□ -1.56
LHX1P48742 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
LHX1P48742 HMGB3P7-201ENST00000400214 611 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms