Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 E2F6P2-201ENST00000420708 748 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 GLUD1P9-201ENST00000420997 1173 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 AC097523.2-201ENST00000435551 652 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TNFSF9P41273 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF9P41273 TCEA1P3-201ENST00000443005 880 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 AL157385.1-201ENST00000446973 268 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.16□□□□□ -1.58
TNFSF9P41273 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFSF9P41273 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFSF9P41273 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFSF9P41273 GSTP1P1-201ENST00000548078 319 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.16□□□□□ -1.58
TNFSF9P41273 AL110118.1-201ENST00000553543 400 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.16□□□□□ -1.58
TNFSF9P41273 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.16□□□□□ -1.58
TNFSF9P41273 AC068790.7-201ENST00000602347 528 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 AL133406.3-201ENST00000606817 541 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 OR8G7P-201ENST00000616658 848 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFSF9P41273 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFSF9P41273 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
TNFSF9P41273 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF9P41273 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF9P41273 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF9P41273 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.15□□□□□ -1.58
TNFSF9P41273 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TNFSF9P41273 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TNFSF9P41273 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.15□□□□□ -1.58
TNFSF9P41273 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF9P41273 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF9P41273 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFSF9P41273 CBX1P3-201ENST00000413296 527 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF9P41273 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.15□□□□□ -1.59
TNFSF9P41273 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF9P41273 EIF4HP2-201ENST00000424380 563 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF9P41273 AC073264.2-201ENST00000448886 166 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 TPT1P13-201ENST00000449760 499 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 AC009220.1-201ENST00000451614 275 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 AC006967.1-201ENST00000467608 589 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
TNFSF9P41273 RNU1-6P-201ENST00000516290 144 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF9P41273 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.15□□□□□ -1.59
TNFSF9P41273 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.15□□□□□ -1.59
TNFSF9P41273 AC063949.1-201ENST00000552900 865 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF9P41273 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.15□□□□□ -1.59
TNFSF9P41273 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF9P41273 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
TNFSF9P41273 NCOA4P2-201ENST00000340589 1813 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TNFSF9P41273 DDX18P5-201ENST00000534547 1306 ntBASIC5.15□□□□□ -1.59
TNFSF9P41273 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TNFSF9P41273 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TNFSF9P41273 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 RBPJP2-201ENST00000618187 1444 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 TET1P1-201ENST00000426627 2301 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TNFSF9P41273 AC017079.1-201ENST00000333650 415 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 RNA5SP505-201ENST00000364748 108 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TNFSF9P41273 AL590762.2-201ENST00000395798 571 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 U3.35-201ENST00000408405 208 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 RN7SKP106-201ENST00000410832 272 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 AC016397.1-201ENST00000412463 242 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 AL590139.1-201ENST00000416267 400 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 TMBIM7P-201ENST00000418074 855 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.14□□□□□ -1.59
TNFSF9P41273 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF9P41273 AC016831.4-201ENST00000438302 307 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 RPSAP41-201ENST00000439695 860 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF9P41273 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF9P41273 CEACAMP6-201ENST00000452007 574 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 RN7SL354P-201ENST00000469282 294 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 AC090602.1-201ENST00000469695 252 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 CR383656.1-201ENST00000484916 377 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 AC093890.1-201ENST00000502554 540 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFSF9P41273 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF9P41273 RNA5SP249-201ENST00000516127 99 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TNFSF9P41273 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.14□□□□□ -1.59
TNFSF9P41273 AP006289.1-201ENST00000538089 277 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.14□□□□□ -1.59
TNFSF9P41273 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.14□□□□□ -1.59
TNFSF9P41273 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF9P41273 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.14□□□□□ -1.59
TNFSF9P41273 MIR6780A-201ENST00000615089 68 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 AC015804.1-201ENST00000622935 435 ntBASIC5.14□□□□□ -1.59
TNFSF9P41273 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms