Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SLC6A4P31645 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SLC6A4P31645 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SLC6A4P31645 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 RNU6-224P-201ENST00000384055 107 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 AC005042.1-201ENST00000393397 800 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 MTCO1P56-201ENST00000401674 224 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 OR3A2-201ENST00000408891 1076 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 AC092638.1-201ENST00000411966 1275 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 MTND2P18-201ENST00000419962 1030 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC6A4P31645 KRT8P51-201ENST00000438938 274 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.78□□□□□ -1.48
SLC6A4P31645 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.78□□□□□ -1.48
SLC6A4P31645 AL592437.1-201ENST00000443781 492 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC6A4P31645 MTND1P29-201ENST00000448112 647 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 RSL24D1P3-201ENST00000449255 495 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 RPS26P39-201ENST00000469206 341 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 RN7SL184P-201ENST00000488308 297 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.78□□□□□ -1.48
SLC6A4P31645 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.78□□□□□ -1.48
SLC6A4P31645 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC6A4P31645 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 ATP5LP3-201ENST00000514223 304 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC6A4P31645 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 OR5AM1P-201ENST00000532136 1032 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 AC137627.1-201ENST00000545761 289 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.78□□□□□ -1.48
SLC6A4P31645 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC6A4P31645 MIR3176-201ENST00000582210 90 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.78□□□□□ -1.48
SLC6A4P31645 AC012557.2-201ENST00000605919 418 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 AC007349.4-201ENST00000608114 532 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 AL121594.5-201ENST00000631724 573 ntBASIC5.78□□□□□ -1.48
SLC6A4P31645 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SLC6A4P31645 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SLC6A4P31645 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SLC6A4P31645 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.78□□□□□ -1.48
SLC6A4P31645 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SLC6A4P31645 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.78□□□□□ -1.48
SLC6A4P31645 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC6A4P31645 AC068870.1-201ENST00000563737 2455 ntBASIC5.77□□□□□ -1.48
SLC6A4P31645 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC6A4P31645 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC6A4P31645 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC6A4P31645 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SLC6A4P31645 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SLC6A4P31645 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC6A4P31645 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SLC6A4P31645 RN7SKP160-201ENST00000363804 340 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC6A4P31645 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC6A4P31645 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SLC6A4P31645 RNU1-136P-201ENST00000384181 164 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 AL391361.1-201ENST00000405580 489 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC6A4P31645 RPS7P9-201ENST00000414704 586 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 UBE2V1P1-201ENST00000430836 445 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 OR6D1P-201ENST00000436165 939 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SLC6A4P31645 OR51B8P-201ENST00000449892 769 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 AC011037.1-201ENST00000483964 558 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 AC004815.1-201ENST00000484185 331 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 PDCL3P4-201ENST00000489621 720 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 EIF3LP3-201ENST00000495197 822 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.77□□□□□ -1.49
SLC6A4P31645 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC6A4P31645 AC027026.1-201ENST00000532323 742 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.77□□□□□ -1.49
SLC6A4P31645 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 AL442163.2-201ENST00000553912 710 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.77□□□□□ -1.49
SLC6A4P31645 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 MIR4489-201ENST00000578869 62 ntBASIC5.77□□□□□ -1.49
SLC6A4P31645 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SLC6A4P31645 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms