Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 APOA2-207ENST00000470459 416 ntTSL 5 BASIC7.52□□□□□ -1.21
CLIP1P30622 RPL5P12-201ENST00000477071 851 ntBASIC7.52□□□□□ -1.21
CLIP1P30622 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CLIP1P30622 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 AL031119.1-201ENST00000404707 1879 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
CLIP1P30622 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
CLIP1P30622 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC7.51□□□□□ -1.21
CLIP1P30622 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC7.51□□□□□ -1.21
CLIP1P30622 OR56B2P-202ENST00000641377 2453 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.51□□□□□ -1.21
CLIP1P30622 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 MIR659-201ENST00000384963 97 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.51□□□□□ -1.21
CLIP1P30622 OR5M12P-201ENST00000423388 929 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 RPL12P34-201ENST00000424532 479 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 RPEP3-201ENST00000425462 676 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 VTI1BP4-201ENST00000427516 527 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 YWHAZP2-201ENST00000440317 728 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.51□□□□□ -1.21
CLIP1P30622 AC013356.1-201ENST00000489027 564 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
CLIP1P30622 PARP1P2-201ENST00000556806 195 ntBASIC7.51□□□□□ -1.21
CLIP1P30622 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.51□□□□□ -1.21
CLIP1P30622 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.51□□□□□ -1.21
CLIP1P30622 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CLIP1P30622 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLIP1P30622 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLIP1P30622 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC7.5□□□□□ -1.21
CLIP1P30622 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLIP1P30622 RN7SKP267-201ENST00000410381 285 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.5□□□□□ -1.21
CLIP1P30622 E2F6P2-201ENST00000420708 748 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.5□□□□□ -1.21
CLIP1P30622 ARL2BPP10-201ENST00000446487 531 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 AC009963.2-201ENST00000453431 138 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 AC103987.1-201ENST00000473394 348 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.5□□□□□ -1.21
CLIP1P30622 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.5□□□□□ -1.21
CLIP1P30622 NIP7P2-201ENST00000485801 544 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.5□□□□□ -1.21
CLIP1P30622 AC008782.1-201ENST00000603386 430 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 OR7A19P-201ENST00000608051 733 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 AL121873.1-201ENST00000616013 524 ntBASIC7.5□□□□□ -1.21
CLIP1P30622 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC7.5□□□□□ -1.21
CLIP1P30622 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CLIP1P30622 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CLIP1P30622 AL138820.1-201ENST00000617901 5305 ntBASIC7.49□□□□□ -1.21
CLIP1P30622 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP1P30622 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP1P30622 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP1P30622 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP1P30622 AC007016.1-201ENST00000512110 244 ntBASIC7.49□□□□□ -1.21
CLIP1P30622 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP1P30622 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.49□□□□□ -1.21
CLIP1P30622 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP1P30622 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.49□□□□□ -1.21
CLIP1P30622 RN7SL652P-201ENST00000577769 300 ntBASIC7.49□□□□□ -1.21
CLIP1P30622 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.49□□□□□ -1.21
CLIP1P30622 AC093765.1-201ENST00000603758 881 ntBASIC7.49□□□□□ -1.21
CLIP1P30622 AL356218.2-201ENST00000605264 187 ntBASIC7.49□□□□□ -1.21
CLIP1P30622 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC7.49□□□□□ -1.21
CLIP1P30622 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.49□□□□□ -1.21
CLIP1P30622 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLIP1P30622 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.49□□□□□ -1.21
CLIP1P30622 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP1P30622 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP1P30622 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP1P30622 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP1P30622 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP1P30622 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP1P30622 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP1P30622 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.48□□□□□ -1.21
CLIP1P30622 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP1P30622 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC7.48□□□□□ -1.21
CLIP1P30622 NUTF2P7-201ENST00000453086 375 ntBASIC7.48□□□□□ -1.21
CLIP1P30622 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP1P30622 AP001781.1-201ENST00000530977 207 ntBASIC7.48□□□□□ -1.21
CLIP1P30622 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC7.48□□□□□ -1.21
CLIP1P30622 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.48□□□□□ -1.21
CLIP1P30622 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP1P30622 AC008833.1-201ENST00000611633 691 ntBASIC7.48□□□□□ -1.21
CLIP1P30622 OR8G7P-201ENST00000616658 848 ntBASIC7.48□□□□□ -1.21
CLIP1P30622 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP1P30622 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC7.48□□□□□ -1.21
CLIP1P30622 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP1P30622 AC135352.1-201ENST00000506173 1418 ntBASIC7.48□□□□□ -1.21
CLIP1P30622 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.48□□□□□ -1.21
CLIP1P30622 AC104623.2-202ENST00000623477 4002 ntBASIC7.48□□□□□ -1.21
CLIP1P30622 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC7.48□□□□□ -1.21
CLIP1P30622 AC139713.2-214ENST00000642059 1811 ntBASIC7.48□□□□□ -1.21
CLIP1P30622 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLIP1P30622 AC004656.1-201ENST00000568479 4951 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms