Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 AC234772.3-201ENST00000602277 528 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 AL445222.1-201ENST00000607259 628 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 STMN1P1-201ENST00000617809 440 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.54□□□□□ -1.36
CNGA1P29973 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 AC136428.4-201ENST00000634254 1155 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.54□□□□□ -1.36
CNGA1P29973 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 AC093671.1-201ENST00000624981 2929 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 AL133268.1-201ENST00000405676 1401 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 ENSAP3-201ENST00000312710 333 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 AP002530.1-201ENST00000405705 684 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 SSR1P2-201ENST00000415208 787 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.53□□□□□ -1.36
CNGA1P29973 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.53□□□□□ -1.36
CNGA1P29973 AC246680.2-201ENST00000422106 389 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.53□□□□□ -1.36
CNGA1P29973 RPL7P29-201ENST00000437151 728 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 RPL12P3-201ENST00000440080 396 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 AC092170.1-201ENST00000440211 356 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 MRPL35P2-201ENST00000448009 511 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 AC092155.2-201ENST00000454675 477 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 RNU7-27P-201ENST00000459281 62 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 RN7SL583P-201ENST00000475692 287 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 AC134050.1-201ENST00000495088 933 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 RPL15P21-201ENST00000495592 567 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 RN7SL808P-201ENST00000496066 299 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.53□□□□□ -1.36
CNGA1P29973 AC119751.1-201ENST00000513357 765 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 RNU6-311P-201ENST00000516224 102 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.53□□□□□ -1.36
CNGA1P29973 NRBF2P4-201ENST00000520874 850 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.53□□□□□ -1.36
CNGA1P29973 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.53□□□□□ -1.36
CNGA1P29973 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.53□□□□□ -1.36
CNGA1P29973 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.53□□□□□ -1.36
CNGA1P29973 AL357094.1-201ENST00000603845 844 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 AC013468.1-201ENST00000608680 598 ntBASIC6.53□□□□□ -1.36
CNGA1P29973 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.53□□□□□ -1.36
CNGA1P29973 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNGA1P29973 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.53□□□□□ -1.36
CNGA1P29973 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.36
CNGA1P29973 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CNGA1P29973 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CNGA1P29973 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CNGA1P29973 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.52□□□□□ -1.37
CNGA1P29973 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.52□□□□□ -1.37
CNGA1P29973 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CNGA1P29973 THAP12P9-201ENST00000503971 2360 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CNGA1P29973 AL161912.4-201ENST00000623889 2468 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.52□□□□□ -1.37
CNGA1P29973 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CNGA1P29973 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CNGA1P29973 AC022164.1-201ENST00000568767 2673 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.52□□□□□ -1.37
CNGA1P29973 AC073055.1-201ENST00000456901 1621 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 AP002512.4-202ENST00000641599 4530 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CNGA1P29973 AL159987.1-201ENST00000347911 293 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 RNA5SP211-201ENST00000365516 117 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.52□□□□□ -1.37
CNGA1P29973 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.52□□□□□ -1.37
CNGA1P29973 LINC01881-201ENST00000416103 412 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.52□□□□□ -1.37
CNGA1P29973 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CNGA1P29973 XKRYP1-201ENST00000423438 492 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.52□□□□□ -1.37
CNGA1P29973 AC092634.2-201ENST00000428146 1010 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.52□□□□□ -1.37
CNGA1P29973 XKRYP2-201ENST00000432915 492 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 CNOT7P2-201ENST00000441051 832 ntBASIC6.52□□□□□ -1.37
CNGA1P29973 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms