Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL161722.2-201ENST00000434731 981 ntBASIC4.34□□□□□ -1.71
USF1P22415 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.34□□□□□ -1.71
USF1P22415 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.34□□□□□ -1.71
USF1P22415 NPM1P33-201ENST00000438918 872 ntBASIC4.34□□□□□ -1.71
USF1P22415 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.34□□□□□ -1.71
USF1P22415 AC090804.1-201ENST00000448870 490 ntBASIC4.34□□□□□ -1.71
USF1P22415 TPT1P13-201ENST00000449760 499 ntBASIC4.34□□□□□ -1.71
USF1P22415 OR52E3P-201ENST00000452083 936 ntBASIC4.34□□□□□ -1.71
USF1P22415 AC002553.2-201ENST00000453217 340 ntBASIC4.34□□□□□ -1.71
USF1P22415 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.34□□□□□ -1.71
USF1P22415 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.34□□□□□ -1.71
USF1P22415 CEACAMP10-202ENST00000495431 496 ntBASIC4.34□□□□□ -1.71
USF1P22415 ENPP7P11-201ENST00000505915 627 ntBASIC4.34□□□□□ -1.71
USF1P22415 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.34□□□□□ -1.71
USF1P22415 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.34□□□□□ -1.71
USF1P22415 NPM1P52-201ENST00000518264 846 ntBASIC4.34□□□□□ -1.71
USF1P22415 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.34□□□□□ -1.71
USF1P22415 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.34□□□□□ -1.71
USF1P22415 OR11H3P-201ENST00000554547 982 ntBASIC4.34□□□□□ -1.71
USF1P22415 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.34□□□□□ -1.71
USF1P22415 MIR4330-201ENST00000579077 105 ntBASIC4.34□□□□□ -1.71
USF1P22415 AC127024.5-201ENST00000580085 462 ntBASIC4.34□□□□□ -1.71
USF1P22415 AC233702.9-201ENST00000581528 203 ntBASIC4.34□□□□□ -1.71
USF1P22415 AC091932.2-201ENST00000623014 291 ntBASIC4.34□□□□□ -1.71
USF1P22415 AC135068.5-201ENST00000624197 983 ntBASIC4.34□□□□□ -1.71
USF1P22415 AP003400.3-201ENST00000624904 346 ntBASIC4.34□□□□□ -1.71
USF1P22415 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.34□□□□□ -1.71
USF1P22415 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
USF1P22415 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USF1P22415 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
USF1P22415 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.34□□□□□ -1.72
USF1P22415 AC073136.1-201ENST00000449426 2884 ntBASIC4.34□□□□□ -1.72
USF1P22415 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
USF1P22415 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
USF1P22415 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USF1P22415 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.34□□□□□ -1.72
USF1P22415 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USF1P22415 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USF1P22415 AP000542.2-201ENST00000623199 6179 ntBASIC4.34□□□□□ -1.72
USF1P22415 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USF1P22415 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
USF1P22415 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USF1P22415 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
USF1P22415 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.33□□□□□ -1.72
USF1P22415 AC011755.1-201ENST00000623763 2049 ntBASIC4.33□□□□□ -1.72
USF1P22415 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.33□□□□□ -1.72
USF1P22415 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USF1P22415 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.33□□□□□ -1.72
USF1P22415 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
USF1P22415 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.33□□□□□ -1.72
USF1P22415 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 RNA5SP90-201ENST00000364801 99 ntBASIC4.33□□□□□ -1.72
USF1P22415 OR13C3-201ENST00000374781 1108 ntBASIC4.33□□□□□ -1.72
USF1P22415 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 RNU6-1263P-201ENST00000384601 106 ntBASIC4.33□□□□□ -1.72
USF1P22415 CYB5AP4-201ENST00000396692 399 ntBASIC4.33□□□□□ -1.72
USF1P22415 AC233289.1-201ENST00000403700 508 ntBASIC4.33□□□□□ -1.72
USF1P22415 NPM1P40-201ENST00000412758 733 ntBASIC4.33□□□□□ -1.72
USF1P22415 RPL26P29-201ENST00000415623 438 ntBASIC4.33□□□□□ -1.72
USF1P22415 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.33□□□□□ -1.72
USF1P22415 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.33□□□□□ -1.72
USF1P22415 EI24P4-201ENST00000423683 1078 ntBASIC4.33□□□□□ -1.72
USF1P22415 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.33□□□□□ -1.72
USF1P22415 AC124944.2-201ENST00000429866 1242 ntBASIC4.33□□□□□ -1.72
USF1P22415 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.33□□□□□ -1.72
USF1P22415 MTCO3P17-201ENST00000443775 513 ntBASIC4.33□□□□□ -1.72
USF1P22415 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.33□□□□□ -1.72
USF1P22415 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
USF1P22415 MTND6P32-201ENST00000457611 483 ntBASIC4.33□□□□□ -1.72
USF1P22415 AC107015.1-201ENST00000466902 747 ntBASIC4.33□□□□□ -1.72
USF1P22415 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 NPM1P29-201ENST00000483112 803 ntBASIC4.33□□□□□ -1.72
USF1P22415 RN7SL205P-201ENST00000490174 284 ntBASIC4.33□□□□□ -1.72
USF1P22415 AC113398.2-201ENST00000507630 558 ntBASIC4.33□□□□□ -1.72
USF1P22415 IMPA1P1-201ENST00000510718 842 ntBASIC4.33□□□□□ -1.72
USF1P22415 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.33□□□□□ -1.72
USF1P22415 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 AC008033.2-201ENST00000542626 177 ntBASIC4.33□□□□□ -1.72
USF1P22415 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.33□□□□□ -1.72
USF1P22415 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.33□□□□□ -1.72
USF1P22415 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.33□□□□□ -1.72
USF1P22415 RN7SL52P-201ENST00000584271 284 ntBASIC4.33□□□□□ -1.72
USF1P22415 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.33□□□□□ -1.72
USF1P22415 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
USF1P22415 RN7SL722P-201ENST00000617780 284 ntBASIC4.33□□□□□ -1.72
USF1P22415 RN7SL565P-201ENST00000618246 284 ntBASIC4.33□□□□□ -1.72
USF1P22415 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
USF1P22415 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF1P22415 STX3-208ENST00000641815 3236 ntBASIC4.33□□□□□ -1.72
USF1P22415 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
USF1P22415 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms