Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.97□□□□□ -1.61
XRCC1P18887 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.97□□□□□ -1.61
XRCC1P18887 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
XRCC1P18887 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
XRCC1P18887 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.97□□□□□ -1.61
XRCC1P18887 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.96□□□□□ -1.61
XRCC1P18887 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
XRCC1P18887 SCARNA15-201ENST00000607520 4325 ntBASIC4.96□□□□□ -1.61
XRCC1P18887 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
XRCC1P18887 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
XRCC1P18887 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
XRCC1P18887 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.96□□□□□ -1.62
XRCC1P18887 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.96□□□□□ -1.62
XRCC1P18887 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
XRCC1P18887 RN7SKP104-201ENST00000362605 328 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 RNA5SP123-201ENST00000363244 119 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AL353625.1-202ENST00000366273 571 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
XRCC1P18887 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
XRCC1P18887 Z97832.1-201ENST00000402490 328 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AL035079.1-201ENST00000405210 287 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 RN7SKP97-201ENST00000410966 333 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.96□□□□□ -1.62
XRCC1P18887 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.96□□□□□ -1.62
XRCC1P18887 AC013429.2-201ENST00000418798 781 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 RPS26P13-201ENST00000419030 330 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AL691447.1-201ENST00000419456 387 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.96□□□□□ -1.62
XRCC1P18887 RAB9AP5-201ENST00000437794 597 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.96□□□□□ -1.62
XRCC1P18887 RAB9AP2-201ENST00000443911 597 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
XRCC1P18887 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.96□□□□□ -1.62
XRCC1P18887 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.96□□□□□ -1.62
XRCC1P18887 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
XRCC1P18887 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.96□□□□□ -1.62
XRCC1P18887 RFPL4AP3-201ENST00000515267 345 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.96□□□□□ -1.62
XRCC1P18887 AP001922.4-201ENST00000526967 290 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
XRCC1P18887 PCNPP1-201ENST00000552501 511 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.96□□□□□ -1.62
XRCC1P18887 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.96□□□□□ -1.62
XRCC1P18887 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.96□□□□□ -1.62
XRCC1P18887 AL390726.5-202ENST00000564800 256 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC011487.3-201ENST00000593607 453 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC005084.1-201ENST00000605160 304 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.96□□□□□ -1.62
XRCC1P18887 AC073575.2-201ENST00000614212 627 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.96□□□□□ -1.62
XRCC1P18887 AC107905.1-201ENST00000616204 426 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AC112694.2-201ENST00000623697 768 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 AL353662.3-201ENST00000625131 237 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 MUC2-202ENST00000613187 4845 ntBASIC4.96□□□□□ -1.62
XRCC1P18887 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
XRCC1P18887 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
XRCC1P18887 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
XRCC1P18887 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
XRCC1P18887 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
XRCC1P18887 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
XRCC1P18887 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
XRCC1P18887 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
XRCC1P18887 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
XRCC1P18887 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
XRCC1P18887 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.95□□□□□ -1.62
XRCC1P18887 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.95□□□□□ -1.62
XRCC1P18887 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.95□□□□□ -1.62
XRCC1P18887 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
XRCC1P18887 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
XRCC1P18887 SNORA66-201ENST00000384792 133 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
XRCC1P18887 MIR937-201ENST00000401271 86 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 RNU2-22P-201ENST00000411266 212 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.95□□□□□ -1.62
XRCC1P18887 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
XRCC1P18887 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.95□□□□□ -1.62
XRCC1P18887 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.95□□□□□ -1.62
XRCC1P18887 RPS26P4-201ENST00000431743 355 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 RPL34P20-201ENST00000442771 351 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 AL354714.3-201ENST00000447284 493 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 TRY2P-201ENST00000448860 689 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 HIGD1AP8-201ENST00000453927 274 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.95□□□□□ -1.62
XRCC1P18887 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.95□□□□□ -1.62
XRCC1P18887 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.95□□□□□ -1.62
XRCC1P18887 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.95□□□□□ -1.62
XRCC1P18887 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.95□□□□□ -1.62
XRCC1P18887 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.95□□□□□ -1.62
XRCC1P18887 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.95□□□□□ -1.62
XRCC1P18887 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.95□□□□□ -1.62
XRCC1P18887 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.95□□□□□ -1.62
XRCC1P18887 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.95□□□□□ -1.62
XRCC1P18887 SETP1-201ENST00000556014 845 ntBASIC4.95□□□□□ -1.62
XRCC1P18887 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.95□□□□□ -1.62
XRCC1P18887 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.95□□□□□ -1.62
XRCC1P18887 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms