Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL6A2P12110 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 AL033519.1-201ENST00000407266 307 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 RNU6-575P-201ENST00000411326 105 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 RNA5SP498-201ENST00000411342 120 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.06□□□□□ -1.44
COL6A2P12110 RAD23BP2-201ENST00000416003 1207 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 NPM1P11-201ENST00000417106 855 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 PRUNEP1-201ENST00000425846 705 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.06□□□□□ -1.44
COL6A2P12110 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 ARL5AP2-201ENST00000444698 533 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 MTCO2P25-201ENST00000447065 681 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 RHEBP2-201ENST00000450289 600 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 RPL31P11-202ENST00000454082 372 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 RANP1-206ENST00000455094 651 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AC019084.1-201ENST00000457337 432 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 TRBV5-2-201ENST00000489095 273 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 GM2AP2-201ENST00000491764 562 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 MTATP6P22-201ENST00000507369 598 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 DUX4L52-201ENST00000549363 777 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.06□□□□□ -1.44
COL6A2P12110 AC074051.3-201ENST00000570238 358 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.06□□□□□ -1.44
COL6A2P12110 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.06□□□□□ -1.44
COL6A2P12110 AP005137.2-201ENST00000609238 400 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 RN7SL261P-201ENST00000613441 282 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 MIR6811-201ENST00000620409 58 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 MIR6813-201ENST00000621638 56 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 U6.107-201ENST00000637108 79 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 DNM1P47-203ENST00000571780 12667 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AL355852.1-201ENST00000454081 1771 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL6A2P12110 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 AC007342.5-201ENST00000571340 2142 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.05□□□□□ -1.44
COL6A2P12110 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.05□□□□□ -1.44
COL6A2P12110 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL6A2P12110 RNA5SP85-201ENST00000365378 119 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 MIR525-201ENST00000384978 85 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 AL034417.1-201ENST00000399343 800 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 SNORA11.5-201ENST00000408163 128 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 UBE2V1P10-201ENST00000414685 269 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AL049610.1-201ENST00000423374 372 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL6A2P12110 AL022331.1-201ENST00000429025 477 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL6A2P12110 USP24P1-201ENST00000433802 779 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 FTH1P16-201ENST00000435241 552 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 KRT8P51-201ENST00000438938 274 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 USP9YP22-201ENST00000438971 294 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.05□□□□□ -1.44
COL6A2P12110 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AL445991.1-201ENST00000450381 475 ntBASIC6.05□□□□□ -1.44
COL6A2P12110 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.05□□□□□ -1.44
COL6A2P12110 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.05□□□□□ -1.44
COL6A2P12110 CEACAMP11-201ENST00000455211 583 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms