Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC007064.3-201ENST00000422608 359 ntBASIC5.25□□□□□ -1.57
KRT3P12035 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.25□□□□□ -1.57
KRT3P12035 Z85994.2-201ENST00000434327 452 ntBASIC5.25□□□□□ -1.57
KRT3P12035 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.25□□□□□ -1.57
KRT3P12035 RPL34P20-201ENST00000442771 351 ntBASIC5.25□□□□□ -1.57
KRT3P12035 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.25□□□□□ -1.57
KRT3P12035 AC012512.1-201ENST00000446594 718 ntBASIC5.25□□□□□ -1.57
KRT3P12035 AC002553.2-201ENST00000453217 340 ntBASIC5.25□□□□□ -1.57
KRT3P12035 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.25□□□□□ -1.57
KRT3P12035 RPS17P2-201ENST00000461663 408 ntBASIC5.25□□□□□ -1.57
KRT3P12035 AC107015.1-201ENST00000466902 747 ntBASIC5.25□□□□□ -1.57
KRT3P12035 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRT3P12035 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.25□□□□□ -1.57
KRT3P12035 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.25□□□□□ -1.57
KRT3P12035 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.25□□□□□ -1.57
KRT3P12035 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.25□□□□□ -1.57
KRT3P12035 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.25□□□□□ -1.57
KRT3P12035 RFPL4AP5-201ENST00000514977 504 ntBASIC5.25□□□□□ -1.57
KRT3P12035 RPL23AP53-201ENST00000521854 457 ntBASIC5.25□□□□□ -1.57
KRT3P12035 OR10D4P-201ENST00000525892 951 ntBASIC5.25□□□□□ -1.57
KRT3P12035 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRT3P12035 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRT3P12035 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRT3P12035 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRT3P12035 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.25□□□□□ -1.57
KRT3P12035 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.25□□□□□ -1.57
KRT3P12035 AC006116.3-201ENST00000592968 361 ntBASIC5.25□□□□□ -1.57
KRT3P12035 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRT3P12035 LINC01739-205ENST00000641890 573 ntBASIC5.25□□□□□ -1.57
KRT3P12035 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRT3P12035 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRT3P12035 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
KRT3P12035 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.25□□□□□ -1.57
KRT3P12035 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.25□□□□□ -1.57
KRT3P12035 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRT3P12035 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.25□□□□□ -1.57
KRT3P12035 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
KRT3P12035 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.24□□□□□ -1.57
KRT3P12035 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRT3P12035 SNORA73.1-201ENST00000363107 205 ntBASIC5.24□□□□□ -1.57
KRT3P12035 RNA5SP455-201ENST00000365190 119 ntBASIC5.24□□□□□ -1.57
KRT3P12035 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRT3P12035 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRT3P12035 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.24□□□□□ -1.57
KRT3P12035 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
KRT3P12035 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.24□□□□□ -1.57
KRT3P12035 MTND3P4-201ENST00000453537 303 ntBASIC5.24□□□□□ -1.57
KRT3P12035 AL356981.1-201ENST00000454879 684 ntBASIC5.24□□□□□ -1.57
KRT3P12035 OR2AF1P-201ENST00000454899 889 ntBASIC5.24□□□□□ -1.57
KRT3P12035 AL356390.1-201ENST00000455684 397 ntBASIC5.24□□□□□ -1.57
KRT3P12035 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.24□□□□□ -1.57
KRT3P12035 RN7SL799P-201ENST00000475891 298 ntBASIC5.24□□□□□ -1.57
KRT3P12035 BX284632.1-201ENST00000478218 541 ntBASIC5.24□□□□□ -1.57
KRT3P12035 AC098799.1-201ENST00000504752 800 ntBASIC5.24□□□□□ -1.57
KRT3P12035 RNA5SP43-201ENST00000516559 110 ntBASIC5.24□□□□□ -1.57
KRT3P12035 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.24□□□□□ -1.57
KRT3P12035 HAUS8P1-201ENST00000549005 542 ntBASIC5.24□□□□□ -1.57
KRT3P12035 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 AL627230.1-201ENST00000613077 211 ntBASIC5.24□□□□□ -1.57
KRT3P12035 AL512624.1-201ENST00000613638 469 ntBASIC5.24□□□□□ -1.57
KRT3P12035 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 AL591926.8-201ENST00000616876 211 ntBASIC5.24□□□□□ -1.57
KRT3P12035 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 TMEM30CP-203ENST00000637814 1035 ntBASIC5.24□□□□□ -1.57
KRT3P12035 SAMMSON-227ENST00000642114 1199 ntBASIC5.24□□□□□ -1.57
KRT3P12035 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.24□□□□□ -1.57
KRT3P12035 ECM1P2-201ENST00000503354 1577 ntBASIC5.24□□□□□ -1.57
KRT3P12035 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
KRT3P12035 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRT3P12035 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRT3P12035 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRT3P12035 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.23□□□□□ -1.57
KRT3P12035 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.23□□□□□ -1.57
KRT3P12035 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRT3P12035 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KRT3P12035 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.23□□□□□ -1.57
KRT3P12035 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KRT3P12035 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KRT3P12035 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KRT3P12035 RNU6-618P-201ENST00000363518 112 ntBASIC5.23□□□□□ -1.57
KRT3P12035 U8.4-201ENST00000363626 134 ntBASIC5.23□□□□□ -1.57
KRT3P12035 AC083799.1-201ENST00000366451 910 ntBASIC5.23□□□□□ -1.57
KRT3P12035 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms