Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGB1P09429 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGB1P09429 AC138832.1-201ENST00000522871 556 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGB1P09429 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGB1P09429 AC137627.1-201ENST00000545761 289 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.76□□□□□ -1.33
HMGB1P09429 AC068993.1-201ENST00000546724 589 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGB1P09429 AC010680.3-201ENST00000604215 520 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AC091488.1-201ENST00000604239 660 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AC005618.4-201ENST00000625053 554 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGB1P09429 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGB1P09429 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.76□□□□□ -1.33
HMGB1P09429 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
HMGB1P09429 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGB1P09429 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 AC138907.8-201ENST00000623981 2256 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC140134.1-201ENST00000511830 3544 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGB1P09429 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 AL512646.1-201ENST00000269395 1077 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGB1P09429 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HMGB1P09429 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGB1P09429 RNU6-1279P-201ENST00000383917 103 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HMGB1P09429 SNORD65C-201ENST00000390962 71 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGB1P09429 AC241520.1-201ENST00000422654 1099 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGB1P09429 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGB1P09429 AL096829.2-201ENST00000446582 742 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGB1P09429 AL162388.1-201ENST00000450912 352 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 RPS6P2-201ENST00000454208 705 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGB1P09429 AC022215.1-201ENST00000481770 362 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGB1P09429 NAMPTP2-201ENST00000505629 1115 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGB1P09429 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGB1P09429 IGLV3-30-201ENST00000524362 298 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGB1P09429 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGB1P09429 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGB1P09429 MIR4789-201ENST00000577469 82 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGB1P09429 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGB1P09429 HMGB2P1-201ENST00000591146 634 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC113194.1-201ENST00000606037 500 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC009163.6-201ENST00000612367 342 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC018926.1-201ENST00000616335 435 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGB1P09429 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGB1P09429 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 AC025470.1-201ENST00000510053 2032 ntBASIC6.75□□□□□ -1.33
HMGB1P09429 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGB1P09429 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HMGB1P09429 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGB1P09429 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P09429 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P09429 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGB1P09429 MAPK10-338ENST00000641647 3362 ntBASIC6.74□□□□□ -1.33
HMGB1P09429 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HMGB1P09429 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGB1P09429 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P09429 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.74□□□□□ -1.33
HMGB1P09429 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
HMGB1P09429 AC011933.2-201ENST00000578539 2790 ntBASIC6.74□□□□□ -1.33
HMGB1P09429 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P09429 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P09429 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HMGB1P09429 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P09429 RPS3AP2-201ENST00000407190 754 ntBASIC6.74□□□□□ -1.33
HMGB1P09429 RNU6-272P-201ENST00000411028 104 ntBASIC6.74□□□□□ -1.33
HMGB1P09429 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGB1P09429 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGB1P09429 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P09429 BX323845.3-201ENST00000428215 527 ntBASIC6.74□□□□□ -1.33
HMGB1P09429 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGB1P09429 FO393414.1-201ENST00000428697 1184 ntBASIC6.74□□□□□ -1.33
HMGB1P09429 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGB1P09429 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGB1P09429 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.74□□□□□ -1.33
HMGB1P09429 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGB1P09429 MTND1P33-201ENST00000446251 917 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms