Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MTND2P40-201ENST00000436718 841 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A2P05997 H2AFZP5-201ENST00000446960 382 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 AC104763.1-201ENST00000475274 360 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 AC025164.1-201ENST00000496249 478 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A2P05997 DPPA3P2-201ENST00000553589 478 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 ADAM3B-201ENST00000569937 840 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 AC073137.1-201ENST00000605636 634 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A2P05997 RNA5SP196-201ENST00000625967 102 ntBASIC6.22□□□□□ -1.41
COL5A2P05997 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.21□□□□□ -1.41
COL5A2P05997 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL5A2P05997 AC073342.2-201ENST00000595842 1800 ntBASIC6.21□□□□□ -1.41
COL5A2P05997 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL5A2P05997 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.21□□□□□ -1.42
COL5A2P05997 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
COL5A2P05997 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
COL5A2P05997 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A2P05997 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A2P05997 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.21□□□□□ -1.42
COL5A2P05997 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
COL5A2P05997 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
COL5A2P05997 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A2P05997 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.21□□□□□ -1.42
COL5A2P05997 PRPF38AP1-201ENST00000451976 933 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.21□□□□□ -1.42
COL5A2P05997 AC034236.1-201ENST00000469891 373 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 RN7SL810P-201ENST00000493031 276 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 AC073073.1-201ENST00000493920 463 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 AC016559.2-201ENST00000510759 359 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.21□□□□□ -1.42
COL5A2P05997 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A2P05997 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A2P05997 GLRXP2-201ENST00000555594 321 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 AC025884.1-201ENST00000556034 378 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 AC090948.2-201ENST00000607363 564 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 SNX18P1Y-201ENST00000616231 511 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.21□□□□□ -1.42
COL5A2P05997 OR8B1P-202ENST00000641132 1178 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 AL122126.1-201ENST00000546905 1318 ntBASIC6.21□□□□□ -1.42
COL5A2P05997 CASC19-255ENST00000641733 1385 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
COL5A2P05997 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
COL5A2P05997 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL5A2P05997 AL355834.1-201ENST00000556602 3965 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.2□□□□□ -1.42
COL5A2P05997 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL5A2P05997 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.2□□□□□ -1.42
COL5A2P05997 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL5A2P05997 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.2□□□□□ -1.42
COL5A2P05997 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL5A2P05997 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL5A2P05997 RN7SKP280-201ENST00000364196 304 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 MIR23A-201ENST00000385245 73 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.2□□□□□ -1.42
COL5A2P05997 OR1F12-201ENST00000402365 945 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 ARL4AP5-201ENST00000404372 599 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 TMSB10P2-201ENST00000416049 131 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 RPL34P6-201ENST00000432390 345 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.2□□□□□ -1.42
COL5A2P05997 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.2□□□□□ -1.42
COL5A2P05997 NUTF2P3-201ENST00000448540 384 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 SNORA84-201ENST00000459229 133 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 MED28P5-201ENST00000528254 438 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.2□□□□□ -1.42
COL5A2P05997 AC034105.4-201ENST00000568304 277 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 AP005019.3-201ENST00000620418 560 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 AL023881.1-201ENST00000621088 301 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 AC008785.1-201ENST00000624475 456 ntBASIC6.2□□□□□ -1.42
COL5A2P05997 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
COL5A2P05997 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A2P05997 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A2P05997 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A2P05997 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
COL5A2P05997 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A2P05997 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC6.19□□□□□ -1.42
COL5A2P05997 RNU1-85P-201ENST00000364127 164 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 AL359837.1-201ENST00000381357 287 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 AL590762.2-201ENST00000395798 571 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 AL445189.1-201ENST00000405722 338 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 RNU4-64P-201ENST00000410795 131 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 GPS2P1-201ENST00000411761 986 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 RPL36AP36-201ENST00000418616 301 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 TDGF1P1-201ENST00000445734 527 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.19□□□□□ -1.42
COL5A2P05997 RN7SL98P-201ENST00000462271 300 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A2P05997 AC010476.1-201ENST00000519111 851 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 AC040958.1-201ENST00000561102 201 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 MIR4429-201ENST00000580105 73 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 AC245389.1-201ENST00000605141 529 ntBASIC6.19□□□□□ -1.42
COL5A2P05997 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.19□□□□□ -1.42
COL5A2P05997 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.19□□□□□ -1.42
COL5A2P05997 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A2P05997 AC011447.7-201ENST00000624228 1590 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms