Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.37□□□□□ -1.55
VTNP04004 FAM27B-201ENST00000610601 213 ntBASIC5.37□□□□□ -1.55
VTNP04004 MIR6853-201ENST00000619642 74 ntBASIC5.37□□□□□ -1.55
VTNP04004 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VTNP04004 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.37□□□□□ -1.55
VTNP04004 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VTNP04004 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VTNP04004 AC083843.2-201ENST00000568248 6253 ntBASIC5.36□□□□□ -1.55
VTNP04004 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.36□□□□□ -1.55
VTNP04004 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
VTNP04004 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.36□□□□□ -1.55
VTNP04004 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.36□□□□□ -1.55
VTNP04004 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VTNP04004 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.36□□□□□ -1.55
VTNP04004 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 MIR133A2-201ENST00000347538 102 ntBASIC5.36□□□□□ -1.55
VTNP04004 RNU4-23P-201ENST00000362839 140 ntBASIC5.36□□□□□ -1.55
VTNP04004 MIR141-201ENST00000384975 95 ntBASIC5.36□□□□□ -1.55
VTNP04004 RNA5SP345-201ENST00000410646 108 ntBASIC5.36□□□□□ -1.55
VTNP04004 AC119751.6-201ENST00000416712 186 ntBASIC5.36□□□□□ -1.55
VTNP04004 QRSL1P2-201ENST00000418582 964 ntBASIC5.36□□□□□ -1.55
VTNP04004 AL354766.1-201ENST00000423396 542 ntBASIC5.36□□□□□ -1.55
VTNP04004 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.36□□□□□ -1.55
VTNP04004 AC096741.1-201ENST00000472250 846 ntBASIC5.36□□□□□ -1.55
VTNP04004 RPL12P20-201ENST00000475538 479 ntBASIC5.36□□□□□ -1.55
VTNP04004 RPL5P22-201ENST00000480199 884 ntBASIC5.36□□□□□ -1.55
VTNP04004 AGGF1P3-201ENST00000493675 1213 ntBASIC5.36□□□□□ -1.55
VTNP04004 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 AC067805.1-201ENST00000559344 470 ntBASIC5.36□□□□□ -1.55
VTNP04004 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.36□□□□□ -1.55
VTNP04004 AC098935.2-201ENST00000604222 466 ntBASIC5.36□□□□□ -1.55
VTNP04004 AC104687.2-201ENST00000604442 342 ntBASIC5.36□□□□□ -1.55
VTNP04004 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.36□□□□□ -1.55
VTNP04004 AC010424.2-201ENST00000607594 443 ntBASIC5.36□□□□□ -1.55
VTNP04004 CR381572.2-201ENST00000624852 397 ntBASIC5.36□□□□□ -1.55
VTNP04004 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.36□□□□□ -1.55
VTNP04004 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.36□□□□□ -1.55
VTNP04004 MTCO1P22-201ENST00000604619 1360 ntBASIC5.36□□□□□ -1.55
VTNP04004 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VTNP04004 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VTNP04004 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VTNP04004 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VTNP04004 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
VTNP04004 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.35□□□□□ -1.55
VTNP04004 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VTNP04004 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.35□□□□□ -1.55
VTNP04004 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VTNP04004 AC008758.3-201ENST00000507003 1829 ntBASIC5.35□□□□□ -1.55
VTNP04004 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VTNP04004 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.35□□□□□ -1.55
VTNP04004 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.35□□□□□ -1.55
VTNP04004 AC068446.1-201ENST00000556425 1549 ntBASIC5.35□□□□□ -1.55
VTNP04004 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VTNP04004 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VTNP04004 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VTNP04004 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VTNP04004 AL590240.1-201ENST00000334118 313 ntBASIC5.35□□□□□ -1.55
VTNP04004 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.35□□□□□ -1.55
VTNP04004 GLULP6-201ENST00000399502 913 ntBASIC5.35□□□□□ -1.55
VTNP04004 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.35□□□□□ -1.55
VTNP04004 AC016397.1-201ENST00000412463 242 ntBASIC5.35□□□□□ -1.55
VTNP04004 AC114755.2-201ENST00000413520 361 ntBASIC5.35□□□□□ -1.55
VTNP04004 PCNPP4-201ENST00000414817 517 ntBASIC5.35□□□□□ -1.55
VTNP04004 BX510359.2-201ENST00000417920 305 ntBASIC5.35□□□□□ -1.55
VTNP04004 XKRYP6-201ENST00000440468 1116 ntBASIC5.35□□□□□ -1.55
VTNP04004 XKRYP3-201ENST00000442113 1116 ntBASIC5.35□□□□□ -1.55
VTNP04004 RAD1P2-201ENST00000446414 663 ntBASIC5.35□□□□□ -1.55
VTNP04004 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.35□□□□□ -1.55
VTNP04004 ENPP7P11-201ENST00000505915 627 ntBASIC5.35□□□□□ -1.55
VTNP04004 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.35□□□□□ -1.55
VTNP04004 AC026688.1-201ENST00000520639 1168 ntBASIC5.35□□□□□ -1.55
VTNP04004 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.35□□□□□ -1.55
VTNP04004 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.35□□□□□ -1.55
VTNP04004 AC025423.2-201ENST00000537570 439 ntBASIC5.35□□□□□ -1.55
VTNP04004 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VTNP04004 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.35□□□□□ -1.55
VTNP04004 AP000619.2-201ENST00000546014 969 ntBASIC5.35□□□□□ -1.55
VTNP04004 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.35□□□□□ -1.55
VTNP04004 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.35□□□□□ -1.55
VTNP04004 AC209154.1-201ENST00000582156 337 ntBASIC5.35□□□□□ -1.55
VTNP04004 AC022726.1-201ENST00000587475 207 ntBASIC5.35□□□□□ -1.55
VTNP04004 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.35□□□□□ -1.55
VTNP04004 AC068790.7-201ENST00000602347 528 ntBASIC5.35□□□□□ -1.55
VTNP04004 AC068790.4-201ENST00000602474 263 ntBASIC5.35□□□□□ -1.55
VTNP04004 BNIP3P7-201ENST00000605641 516 ntBASIC5.35□□□□□ -1.55
VTNP04004 AC016911.1-201ENST00000613297 452 ntBASIC5.35□□□□□ -1.55
VTNP04004 AC241377.1-201ENST00000619797 406 ntBASIC5.35□□□□□ -1.55
VTNP04004 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.35□□□□□ -1.55
VTNP04004 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms