Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.42□□□□□ -1.54
CHRNA1P02708 TXNP5-201ENST00000441043 315 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.42□□□□□ -1.54
CHRNA1P02708 AL591623.2-201ENST00000449978 222 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AC234781.3-201ENST00000452540 973 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 AC091180.1-201ENST00000462104 372 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AC010326.1-201ENST00000462726 602 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA1P02708 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA1P02708 AL359219.2-201ENST00000555184 348 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.42□□□□□ -1.54
CHRNA1P02708 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.42□□□□□ -1.54
CHRNA1P02708 AC115989.2-201ENST00000578640 563 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA1P02708 MIR4697-201ENST00000582977 78 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 MIR4660-201ENST00000583549 74 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA1P02708 AC007497.1-201ENST00000610421 561 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 AL162574.1-201ENST00000615702 950 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 CR382285.2-201ENST00000624662 1495 ntBASIC5.42□□□□□ -1.54
CHRNA1P02708 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA1P02708 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.42□□□□□ -1.54
CHRNA1P02708 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA1P02708 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CHRNA1P02708 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CHRNA1P02708 RNA5SP332-201ENST00000391063 115 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 AC007068.1-201ENST00000396690 844 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 AL589994.1-201ENST00000404962 340 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 HYALP1-201ENST00000417674 1279 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 AC092017.2-201ENST00000427600 362 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 AC004980.3-201ENST00000447046 365 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 MORF4L2P1-201ENST00000503761 858 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA1P02708 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.41□□□□□ -1.54
CHRNA1P02708 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA1P02708 AL512310.9-201ENST00000553311 948 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 RN7SL290P-201ENST00000578661 300 ntBASIC5.41□□□□□ -1.54
CHRNA1P02708 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA1P02708 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA1P02708 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA1P02708 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA1P02708 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA1P02708 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA1P02708 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
CHRNA1P02708 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA1P02708 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
CHRNA1P02708 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA1P02708 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CHRNA1P02708 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA1P02708 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA1P02708 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA1P02708 LRRC37BP1-201ENST00000398851 714 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 RSU1P3-201ENST00000412878 835 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 AL121878.1-201ENST00000418638 859 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 C4BPAP2-201ENST00000428434 478 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA1P02708 AC002553.2-201ENST00000453217 340 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 AC092905.1-201ENST00000467527 949 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 NDUFA5P9-201ENST00000472609 340 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 RPL12P20-201ENST00000475538 479 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA1P02708 HPRT1P1-201ENST00000509498 657 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 RNA5SP230-201ENST00000517039 122 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA1P02708 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNA1P02708 SOX5P1-201ENST00000524155 1127 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA1P02708 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA1P02708 AC027369.5-201ENST00000533838 755 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 MTND2P17-201ENST00000550281 688 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA1P02708 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA1P02708 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNA1P02708 AC022884.2-201ENST00000578535 580 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 RN7SL690P-201ENST00000582087 240 ntBASIC5.4□□□□□ -1.54
CHRNA1P02708 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms