Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A1P02462 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A1P02462 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A1P02462 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A1P02462 AC022417.1-201ENST00000624768 1303 ntBASIC5.62□□□□□ -1.51
COL4A1P02462 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A1P02462 RPL35AP21-201ENST00000437667 333 ntBASIC5.62□□□□□ -1.51
COL4A1P02462 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A1P02462 RPL23AP43-201ENST00000446445 471 ntBASIC5.62□□□□□ -1.51
COL4A1P02462 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A1P02462 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A1P02462 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A1P02462 AC092653.1-201ENST00000608509 531 ntBASIC5.62□□□□□ -1.51
COL4A1P02462 RNA5SP439-201ENST00000617595 124 ntBASIC5.62□□□□□ -1.51
COL4A1P02462 AC079777.1-201ENST00000623836 1953 ntBASIC5.62□□□□□ -1.51
COL4A1P02462 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL4A1P02462 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A1P02462 AC093297.3-201ENST00000607056 2517 ntBASIC5.62□□□□□ -1.51
COL4A1P02462 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A1P02462 DHX9P1-201ENST00000436565 3076 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A1P02462 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.61□□□□□ -1.51
COL4A1P02462 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 RN7SKP263-201ENST00000411194 309 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.61□□□□□ -1.51
COL4A1P02462 RPS27AP12-201ENST00000429552 465 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 RPL23AP52-201ENST00000439311 478 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 AC091167.1-201ENST00000492017 396 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 AC015795.1-201ENST00000513669 327 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 AC010476.1-201ENST00000519111 851 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.61□□□□□ -1.51
COL4A1P02462 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.61□□□□□ -1.51
COL4A1P02462 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.61□□□□□ -1.51
COL4A1P02462 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A1P02462 AC015914.2-201ENST00000618167 288 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A1P02462 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL4A1P02462 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A1P02462 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A1P02462 AL592182.3-201ENST00000642132 3304 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 AC025031.4-201ENST00000621248 3271 ntBASIC5.61□□□□□ -1.51
COL4A1P02462 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A1P02462 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A1P02462 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL4A1P02462 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 AL121657.1-201ENST00000327215 531 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 SNRPFP1-201ENST00000414761 252 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 AC090686.1-201ENST00000481577 749 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 RN7SL691P-201ENST00000494487 301 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.6□□□□□ -1.51
COL4A1P02462 AK4P6-201ENST00000505168 528 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.6□□□□□ -1.51
COL4A1P02462 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.6□□□□□ -1.51
COL4A1P02462 AC087477.6-201ENST00000559595 843 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 AC027216.1-201ENST00000577726 685 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 MIR1254-2-201ENST00000579553 63 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL4A1P02462 AC011815.3-201ENST00000624194 473 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 TTC41P-205ENST00000551270 3963 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A1P02462 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A1P02462 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A1P02462 AL445487.1-201ENST00000415694 1580 ntBASIC5.6□□□□□ -1.51
COL4A1P02462 RNA5SP151-201ENST00000365632 117 ntBASIC5.59□□□□□ -1.51
COL4A1P02462 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A1P02462 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A1P02462 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A1P02462 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A1P02462 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A1P02462 AL935212.3-201ENST00000450729 284 ntBASIC5.59□□□□□ -1.51
COL4A1P02462 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A1P02462 AC108475.1-201ENST00000507880 950 ntBASIC5.59□□□□□ -1.51
COL4A1P02462 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A1P02462 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
COL4A1P02462 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A1P02462 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A1P02462 AC011477.5-201ENST00000586571 259 ntBASIC5.59□□□□□ -1.51
COL4A1P02462 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A1P02462 VN1R85P-201ENST00000601587 426 ntBASIC5.59□□□□□ -1.51
COL4A1P02462 AL354984.3-201ENST00000604803 325 ntBASIC5.59□□□□□ -1.51
COL4A1P02462 AP000648.2-201ENST00000624182 404 ntBASIC5.59□□□□□ -1.51
COL4A1P02462 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms