Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP000619.3-201ENST00000535634 1127 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.76□□□□□ -1.49
CNOT4O95628 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.76□□□□□ -1.49
CNOT4O95628 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.76□□□□□ -1.49
CNOT4O95628 AC087883.1-201ENST00000551882 391 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 HIGD1AP17-201ENST00000554576 276 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.76□□□□□ -1.49
CNOT4O95628 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.76□□□□□ -1.49
CNOT4O95628 AC245505.1-201ENST00000556398 224 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 AC116553.2-201ENST00000564203 463 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.76□□□□□ -1.49
CNOT4O95628 MIR548Y-201ENST00000582739 110 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.76□□□□□ -1.49
CNOT4O95628 AC018618.2-201ENST00000604770 446 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 AC024941.1-201ENST00000612250 334 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNOT4O95628 MIR6721-201ENST00000617181 87 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.76□□□□□ -1.49
CNOT4O95628 MIR6085-201ENST00000618314 110 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.76□□□□□ -1.49
CNOT4O95628 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.76□□□□□ -1.49
CNOT4O95628 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
CNOT4O95628 AC010325.3-201ENST00000641084 394 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
CNOT4O95628 HSPD1P9-201ENST00000420325 1636 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CNOT4O95628 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.76□□□□□ -1.49
CNOT4O95628 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.76□□□□□ -1.49
CNOT4O95628 AC017007.4-201ENST00000503353 1352 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNOT4O95628 AC025809.2-201ENST00000625085 1802 ntBASIC5.76□□□□□ -1.49
CNOT4O95628 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.76□□□□□ -1.49
CNOT4O95628 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNOT4O95628 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CNOT4O95628 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CNOT4O95628 IFIT1P1-201ENST00000400497 1449 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CNOT4O95628 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.75□□□□□ -1.49
CNOT4O95628 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CNOT4O95628 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 AL603750.1-201ENST00000624216 1717 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.75□□□□□ -1.49
CNOT4O95628 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 RNA5SP435-201ENST00000364044 108 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 RNA5SP512-201ENST00000364550 120 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 RNA5SP485-201ENST00000365053 119 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 RNU6-1119P-201ENST00000384349 108 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 DEFB108C-201ENST00000400154 252 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 AC010385.1-201ENST00000412374 256 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.75□□□□□ -1.49
CNOT4O95628 MTCYBP38-201ENST00000417160 1123 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 AC083862.1-201ENST00000427378 1242 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 AL139415.2-201ENST00000431968 163 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 USP9YP35-201ENST00000435696 412 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 NDUFS5P5-201ENST00000437256 321 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.75□□□□□ -1.49
CNOT4O95628 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 RPL7P1-201ENST00000468161 747 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 RPL7P9-201ENST00000468715 747 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 RPL35AP19-201ENST00000469425 329 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 SETP11-201ENST00000473027 690 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC068522.1-201ENST00000482895 345 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 AC104971.1-201ENST00000495117 578 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC112198.1-201ENST00000505369 1220 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC018797.1-201ENST00000510791 255 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.75□□□□□ -1.49
CNOT4O95628 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNOT4O95628 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
CNOT4O95628 AC006530.1-201ENST00000555980 571 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.75□□□□□ -1.49
CNOT4O95628 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 OR1E3-201ENST00000575608 948 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 AC063977.7-201ENST00000594454 337 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.75□□□□□ -1.49
CNOT4O95628 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.75□□□□□ -1.49
CNOT4O95628 WISP1-OT1-201ENST00000602893 642 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AL606834.2-201ENST00000602954 668 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CNOT4O95628 AL353621.2-201ENST00000605340 133 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AL645933.2-201ENST00000606743 1207 ntBASIC5.75□□□□□ -1.49
CNOT4O95628 AC126118.1-201ENST00000607744 628 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms