Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-769P-201ENST00000384407 104 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HOXA2O43364 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXA2O43364 AC073136.2-201ENST00000417282 849 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 MTCYBP8-201ENST00000422855 651 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXA2O43364 AL022237.1-201ENST00000446663 358 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXA2O43364 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXA2O43364 AC010878.1-201ENST00000456500 1047 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 GAPDHP53-201ENST00000458397 924 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 Y_RNA.631-201ENST00000459607 101 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 RPL23P10-201ENST00000468780 412 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC015724.1-201ENST00000478577 156 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC090096.1-201ENST00000489168 390 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AL035404.1-201ENST00000497982 568 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC008967.1-201ENST00000504843 163 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC017037.1-201ENST00000508460 471 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC006499.2-201ENST00000513470 337 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXA2O43364 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXA2O43364 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXA2O43364 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXA2O43364 OR8A2P-201ENST00000528631 952 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC008055.1-201ENST00000547032 609 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXA2O43364 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXA2O43364 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXA2O43364 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXA2O43364 AC124303.1-201ENST00000605703 360 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 RNU6-87P-201ENST00000607561 108 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXA2O43364 AC243773.3-201ENST00000613270 256 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 AL161420.1-201ENST00000619393 264 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXA2O43364 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXA2O43364 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXA2O43364 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HOXA2O43364 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXA2O43364 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXA2O43364 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXA2O43364 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
HOXA2O43364 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
HOXA2O43364 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HOXA2O43364 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXA2O43364 UGT2B27P-201ENST00000505092 1620 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 RBPJP6-201ENST00000411556 1431 ntBASIC7.78□□□□□ -1.16
HOXA2O43364 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXA2O43364 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.77□□□□□ -1.17
HOXA2O43364 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.77□□□□□ -1.17
HOXA2O43364 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HOXA2O43364 AC090643.1-201ENST00000623600 3100 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
HOXA2O43364 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HOXA2O43364 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HOXA2O43364 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.77□□□□□ -1.17
HOXA2O43364 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
HOXA2O43364 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
HOXA2O43364 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.77□□□□□ -1.17
HOXA2O43364 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HOXA2O43364 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
HOXA2O43364 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HOXA2O43364 OR9K1P-201ENST00000326513 941 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HOXA2O43364 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HOXA2O43364 RNU4-7P-201ENST00000364758 141 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 Y_RNA.381-201ENST00000365666 102 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 Y_RNA.387-201ENST00000383918 102 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
HOXA2O43364 RPS4XP8-201ENST00000402039 771 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 RNU2-62P-201ENST00000410868 191 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 RNU6-1068P-201ENST00000410958 103 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 AC127391.1-201ENST00000411737 98 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 MTND3P8-201ENST00000412909 339 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.77□□□□□ -1.17
HOXA2O43364 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.77□□□□□ -1.17
HOXA2O43364 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HOXA2O43364 RPL36AP53-201ENST00000432891 316 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 CACYBPP1-201ENST00000438592 684 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 AC114755.4-201ENST00000439114 443 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 TXNP5-201ENST00000441043 315 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.77□□□□□ -1.17
HOXA2O43364 GOT2P2-201ENST00000450663 1251 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.77□□□□□ -1.17
HOXA2O43364 TRGVB-201ENST00000453257 471 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 AL590639.1-201ENST00000456484 337 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 RPS27P23-201ENST00000487608 251 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.77□□□□□ -1.17
HOXA2O43364 SNRPCP11-201ENST00000492453 205 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.77□□□□□ -1.17
HOXA2O43364 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.77□□□□□ -1.17
HOXA2O43364 AC011352.2-201ENST00000514574 1016 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.77□□□□□ -1.17
HOXA2O43364 Vault.3-201ENST00000516676 95 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 RN7SKP233-201ENST00000517005 110 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 RNU6-1003P-201ENST00000517099 105 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 AC009117.1-201ENST00000563948 554 ntBASIC7.77□□□□□ -1.17
HOXA2O43364 AC026458.1-201ENST00000564330 438 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms