Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RIPK2O43353 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RIPK2O43353 OR7E156P-201ENST00000400303 464 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 U3.35-201ENST00000408405 208 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 RN7SKP199-201ENST00000410325 305 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.04□□□□□ -1.6
RIPK2O43353 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.04□□□□□ -1.6
RIPK2O43353 AC073136.2-201ENST00000417282 849 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 AC093655.2-201ENST00000425735 631 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 CYCSP6-201ENST00000434498 302 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.04□□□□□ -1.6
RIPK2O43353 CYCSP12-201ENST00000437729 300 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.04□□□□□ -1.6
RIPK2O43353 RPS26P2-201ENST00000440331 348 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 RPS26P41-201ENST00000450370 284 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 AC011225.1-201ENST00000457751 369 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.04□□□□□ -1.6
RIPK2O43353 CCDC75P1-201ENST00000469247 791 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.04□□□□□ -1.6
RIPK2O43353 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIPK2O43353 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.04□□□□□ -1.6
RIPK2O43353 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.04□□□□□ -1.6
RIPK2O43353 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIPK2O43353 AC005726.4-201ENST00000582858 458 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RIPK2O43353 MIR6889-201ENST00000613185 59 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 AC009704.2-201ENST00000618739 483 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 AC145207.9-201ENST00000623802 325 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 AL672167.1-203ENST00000641299 2975 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
RIPK2O43353 AL359922.3-201ENST00000624779 1670 ntBASIC5.04□□□□□ -1.6
RIPK2O43353 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RIPK2O43353 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RIPK2O43353 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RIPK2O43353 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.04□□□□□ -1.6
RIPK2O43353 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RIPK2O43353 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RIPK2O43353 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 SSXP3-201ENST00000442971 1300 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RIPK2O43353 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RIPK2O43353 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.03□□□□□ -1.6
RIPK2O43353 AC019155.1-201ENST00000382242 574 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 AL391422.1-201ENST00000402155 436 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.03□□□□□ -1.6
RIPK2O43353 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.03□□□□□ -1.6
RIPK2O43353 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.03□□□□□ -1.6
RIPK2O43353 AC115283.1-201ENST00000427353 400 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 RPS27P18-201ENST00000431701 247 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 ELOCP10-201ENST00000440624 327 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 BUD31P2-201ENST00000449374 300 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 OTX2P1-201ENST00000450956 354 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.03□□□□□ -1.6
RIPK2O43353 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.03□□□□□ -1.6
RIPK2O43353 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
RIPK2O43353 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.03□□□□□ -1.6
RIPK2O43353 AC117525.1-201ENST00000515228 503 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 SNORD46.2-201ENST00000516021 102 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.03□□□□□ -1.6
RIPK2O43353 AC087477.6-201ENST00000559595 843 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.03□□□□□ -1.6
RIPK2O43353 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.03□□□□□ -1.6
RIPK2O43353 ELOCP34-201ENST00000604436 327 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 MIR7109-201ENST00000613748 65 ntBASIC5.03□□□□□ -1.6
RIPK2O43353 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
RIPK2O43353 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.03□□□□□ -1.6
RIPK2O43353 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.03□□□□□ -1.6
RIPK2O43353 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RIPK2O43353 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RIPK2O43353 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RIPK2O43353 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RIPK2O43353 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RIPK2O43353 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIPK2O43353 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.02□□□□□ -1.61
RIPK2O43353 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIPK2O43353 AC087565.3-202ENST00000642085 1603 ntBASIC5.02□□□□□ -1.61
RIPK2O43353 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.02□□□□□ -1.61
RIPK2O43353 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RIPK2O43353 SNORD96B-201ENST00000386148 79 ntBASIC5.02□□□□□ -1.61
RIPK2O43353 RN7SKP114-201ENST00000410327 279 ntBASIC5.02□□□□□ -1.61
RIPK2O43353 RN7SKP240-201ENST00000410583 375 ntBASIC5.02□□□□□ -1.61
RIPK2O43353 SDHDP6-201ENST00000414693 480 ntBASIC5.02□□□□□ -1.61
RIPK2O43353 OR13Z1P-201ENST00000416141 834 ntBASIC5.02□□□□□ -1.61
RIPK2O43353 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RIPK2O43353 E2F6P2-201ENST00000420708 748 ntBASIC5.02□□□□□ -1.61
RIPK2O43353 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.02□□□□□ -1.61
RIPK2O43353 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms