Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 TXNP5-201ENST00000441043 315 ntBASIC4.86□□□□□ -1.63
LSM1O15116 AC093166.2-201ENST00000455969 1017 ntBASIC4.86□□□□□ -1.63
LSM1O15116 AC023141.9-201ENST00000458734 412 ntBASIC4.86□□□□□ -1.63
LSM1O15116 RPSAP39-201ENST00000467439 883 ntBASIC4.86□□□□□ -1.63
LSM1O15116 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.86□□□□□ -1.63
LSM1O15116 HMGB3P16-201ENST00000508037 287 ntBASIC4.86□□□□□ -1.63
LSM1O15116 AC090568.1-201ENST00000509499 856 ntBASIC4.86□□□□□ -1.63
LSM1O15116 ENPP7P9-201ENST00000514456 627 ntBASIC4.86□□□□□ -1.63
LSM1O15116 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.86□□□□□ -1.63
LSM1O15116 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.86□□□□□ -1.63
LSM1O15116 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LSM1O15116 MIR6861-201ENST00000618657 64 ntBASIC4.86□□□□□ -1.63
LSM1O15116 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LSM1O15116 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LSM1O15116 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LSM1O15116 PANDAR-201ENST00000629595 1506 ntBASIC4.86□□□□□ -1.63
LSM1O15116 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LSM1O15116 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LSM1O15116 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.86□□□□□ -1.63
LSM1O15116 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LSM1O15116 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.85□□□□□ -1.63
LSM1O15116 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.85□□□□□ -1.63
LSM1O15116 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.85□□□□□ -1.63
LSM1O15116 SALL4P2-201ENST00000423288 2910 ntBASIC4.85□□□□□ -1.63
LSM1O15116 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
LSM1O15116 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LSM1O15116 U3.2-201ENST00000362981 210 ntBASIC4.85□□□□□ -1.63
LSM1O15116 RNA5SP132-201ENST00000364725 118 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.85□□□□□ -1.63
LSM1O15116 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.85□□□□□ -1.63
LSM1O15116 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.85□□□□□ -1.63
LSM1O15116 E2F6P2-201ENST00000420708 748 ntBASIC4.85□□□□□ -1.63
LSM1O15116 RPL7L1P9-201ENST00000431298 745 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.85□□□□□ -1.63
LSM1O15116 AL138899.2-201ENST00000439139 499 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.85□□□□□ -1.63
LSM1O15116 AL450023.3-201ENST00000440592 271 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.85□□□□□ -1.63
LSM1O15116 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.85□□□□□ -1.63
LSM1O15116 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 AL691482.1-201ENST00000453255 87 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AC133473.1-201ENST00000455173 299 ntBASIC4.85□□□□□ -1.63
LSM1O15116 RPS17P2-201ENST00000461663 408 ntBASIC4.85□□□□□ -1.63
LSM1O15116 RN7SL717P-201ENST00000478343 297 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.85□□□□□ -1.63
LSM1O15116 OR4A46P-201ENST00000527255 933 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.85□□□□□ -1.63
LSM1O15116 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.85□□□□□ -1.63
LSM1O15116 HMGB3P26-201ENST00000560051 582 ntBASIC4.85□□□□□ -1.63
LSM1O15116 SNORD95-201ENST00000579879 68 ntBASIC4.85□□□□□ -1.63
LSM1O15116 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.85□□□□□ -1.63
LSM1O15116 IMMP1LP3-201ENST00000604197 224 ntBASIC4.85□□□□□ -1.63
LSM1O15116 SNORA35B-201ENST00000607417 129 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AC015982.1-201ENST00000608113 465 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AL135786.2-201ENST00000608422 615 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AC004477.3-201ENST00000614061 590 ntBASIC4.85□□□□□ -1.63
LSM1O15116 AP002967.1-201ENST00000624203 539 ntBASIC4.85□□□□□ -1.63
LSM1O15116 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.85□□□□□ -1.63
LSM1O15116 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 AC068446.1-201ENST00000556425 1549 ntBASIC4.85□□□□□ -1.63
LSM1O15116 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.85□□□□□ -1.63
LSM1O15116 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LSM1O15116 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
LSM1O15116 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LSM1O15116 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LSM1O15116 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LSM1O15116 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LSM1O15116 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LSM1O15116 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.84□□□□□ -1.63
LSM1O15116 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LSM1O15116 SNORA17A-201ENST00000391185 133 ntBASIC4.84□□□□□ -1.63
LSM1O15116 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LSM1O15116 LRRC37BP1-201ENST00000398851 714 ntBASIC4.84□□□□□ -1.63
LSM1O15116 SNORA77-201ENST00000408716 125 ntBASIC4.84□□□□□ -1.63
LSM1O15116 EIF4A1P3-201ENST00000411521 244 ntBASIC4.84□□□□□ -1.63
LSM1O15116 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.84□□□□□ -1.63
LSM1O15116 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.84□□□□□ -1.63
LSM1O15116 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LSM1O15116 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.84□□□□□ -1.63
LSM1O15116 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.84□□□□□ -1.63
LSM1O15116 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LSM1O15116 AP000936.3-201ENST00000438127 255 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms