Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUX2O14529 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUX2O14529 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUX2O14529 MR1-209ENST00000617803 7584 ntTSL 5 BASIC8.34□□□□□ -1.07
CUX2O14529 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CUX2O14529 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CUX2O14529 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC8.34□□□□□ -1.07
CUX2O14529 AL592182.3-201ENST00000642132 3304 ntBASIC8.34□□□□□ -1.07
CUX2O14529 TCP11X1-202ENST00000622971 1372 ntBASIC8.34□□□□□ -1.07
CUX2O14529 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CUX2O14529 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CUX2O14529 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUX2O14529 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CUX2O14529 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.33□□□□□ -1.08
CUX2O14529 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.33□□□□□ -1.08
CUX2O14529 AC000111.2-201ENST00000448200 210 ntBASIC8.33□□□□□ -1.08
CUX2O14529 AL133547.1-201ENST00000448546 220 ntBASIC8.33□□□□□ -1.08
CUX2O14529 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.33□□□□□ -1.08
CUX2O14529 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC8.33□□□□□ -1.08
CUX2O14529 RPS12P31-201ENST00000491419 398 ntBASIC8.33□□□□□ -1.08
CUX2O14529 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.33□□□□□ -1.08
CUX2O14529 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC8.33□□□□□ -1.08
CUX2O14529 AC022360.1-201ENST00000521058 340 ntBASIC8.33□□□□□ -1.08
CUX2O14529 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC8.33□□□□□ -1.08
CUX2O14529 RN7SL703P-201ENST00000578485 302 ntBASIC8.33□□□□□ -1.08
CUX2O14529 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.33□□□□□ -1.08
CUX2O14529 CDRT1-208ENST00000630868 794 ntBASIC8.33□□□□□ -1.08
CUX2O14529 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUX2O14529 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CUX2O14529 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUX2O14529 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC8.33□□□□□ -1.08
CUX2O14529 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC8.33□□□□□ -1.08
CUX2O14529 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUX2O14529 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CUX2O14529 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 RPL23AP26-201ENST00000412728 464 ntBASIC8.32□□□□□ -1.08
CUX2O14529 AC093578.1-201ENST00000415219 368 ntBASIC8.32□□□□□ -1.08
CUX2O14529 AC017019.1-201ENST00000426129 261 ntBASIC8.32□□□□□ -1.08
CUX2O14529 AC090018.1-201ENST00000434369 367 ntBASIC8.32□□□□□ -1.08
CUX2O14529 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC8.32□□□□□ -1.08
CUX2O14529 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC8.32□□□□□ -1.08
CUX2O14529 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC8.32□□□□□ -1.08
CUX2O14529 BUD31P1-201ENST00000521828 359 ntBASIC8.32□□□□□ -1.08
CUX2O14529 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC8.32□□□□□ -1.08
CUX2O14529 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.32□□□□□ -1.08
CUX2O14529 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.32□□□□□ -1.08
CUX2O14529 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC8.32□□□□□ -1.08
CUX2O14529 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
CUX2O14529 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CUX2O14529 MIR372-201ENST00000362225 67 ntBASIC8.32□□□□□ -1.08
CUX2O14529 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
CUX2O14529 AL645608.4-201ENST00000423619 154 ntBASIC8.32□□□□□ -1.08
CUX2O14529 RPS29P17-201ENST00000430795 166 ntBASIC8.32□□□□□ -1.08
CUX2O14529 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.32□□□□□ -1.08
CUX2O14529 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 AC104971.1-201ENST00000495117 578 ntBASIC8.32□□□□□ -1.08
CUX2O14529 IMPA1P1-201ENST00000510718 842 ntBASIC8.32□□□□□ -1.08
CUX2O14529 AC012442.3-202ENST00000636742 206 ntBASIC8.32□□□□□ -1.08
CUX2O14529 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUX2O14529 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CUX2O14529 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUX2O14529 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC8.31□□□□□ -1.08
CUX2O14529 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC8.31□□□□□ -1.08
CUX2O14529 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUX2O14529 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CUX2O14529 RPL23AP59-201ENST00000399415 461 ntBASIC8.31□□□□□ -1.08
CUX2O14529 KRR1P1-201ENST00000419430 803 ntBASIC8.31□□□□□ -1.08
CUX2O14529 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC8.31□□□□□ -1.08
CUX2O14529 AC018644.1-201ENST00000429934 551 ntBASIC8.31□□□□□ -1.08
CUX2O14529 AC016550.3-201ENST00000515706 767 ntBASIC8.31□□□□□ -1.08
CUX2O14529 RN7SL435P-201ENST00000584418 282 ntBASIC8.31□□□□□ -1.08
CUX2O14529 IPO5P1-202ENST00000600039 287 ntBASIC8.31□□□□□ -1.08
CUX2O14529 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC8.31□□□□□ -1.08
CUX2O14529 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC8.31□□□□□ -1.08
CUX2O14529 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUX2O14529 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CUX2O14529 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CUX2O14529 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CUX2O14529 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
CUX2O14529 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC8.31□□□□□ -1.08
CUX2O14529 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.3□□□□□ -1.08
CUX2O14529 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUX2O14529 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUX2O14529 AC007382.1-201ENST00000624376 2618 ntBASIC8.3□□□□□ -1.08
CUX2O14529 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUX2O14529 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CUX2O14529 RNA5SP366-201ENST00000365454 123 ntBASIC8.3□□□□□ -1.08
CUX2O14529 AC011933.1-201ENST00000413334 321 ntBASIC8.3□□□□□ -1.08
CUX2O14529 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUX2O14529 AC116533.1-201ENST00000459748 321 ntBASIC8.3□□□□□ -1.08
CUX2O14529 AC105137.1-201ENST00000484355 562 ntBASIC8.3□□□□□ -1.08
CUX2O14529 PANCR-201ENST00000503456 493 ntTSL 5 BASIC8.3□□□□□ -1.08
CUX2O14529 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms