Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RBFOX3A6NFN3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RBFOX3A6NFN3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RBFOX3A6NFN3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
RBFOX3A6NFN3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.78
RBFOX3A6NFN3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RBFOX3A6NFN3 AL121950.1-201ENST00000624993 2077 ntBASIC3.9□□□□□ -1.78
RBFOX3A6NFN3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RBFOX3A6NFN3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
RBFOX3A6NFN3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 RNU4-2-201ENST00000365668 141 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 U3.35-201ENST00000408405 208 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 MTND4LP13-201ENST00000425022 298 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AL450023.3-201ENST00000440592 271 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 RPL10P17-201ENST00000453852 316 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 RPL5P30-201ENST00000465511 891 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 OR2A1-AS1-202ENST00000467944 422 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 RPS26P28-201ENST00000470806 348 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC105918.1-201ENST00000474399 838 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 RPL23AP65-201ENST00000475608 468 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 SIAH1P1-201ENST00000479411 923 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC113398.2-201ENST00000507630 558 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 SNORA70.20-201ENST00000516848 126 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AP000648.1-201ENST00000529682 397 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 IGBP1P1-201ENST00000554337 1009 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AL031601.1-201ENST00000605702 394 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AL592494.3-201ENST00000609485 464 ntBASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RBFOX3A6NFN3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 RNU1-150P-201ENST00000362491 162 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 RNA5SP477-201ENST00000362639 119 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 RNA5SP435-201ENST00000364044 108 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 LRRC37BP1-201ENST00000398851 714 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AL136131.1-201ENST00000406079 803 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AL133173.1-201ENST00000423458 397 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC127526.2-201ENST00000426436 775 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 HMGB3P9-201ENST00000441799 583 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC005297.1-201ENST00000444765 862 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC105399.1-202ENST00000447303 205 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 PTMAP3-201ENST00000447474 330 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 RN7SL443P-201ENST00000464331 290 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AL136038.1-201ENST00000497246 351 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 RNU6-615P-201ENST00000516065 106 ntBASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.89□□□□□ -1.79
RBFOX3A6NFN3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms