Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 RPS7P5-201ENST00000441482 581 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 GTF2F2P2-201ENST00000445825 721 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 FDX1P2-201ENST00000450769 375 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 SLC31A1P1-201ENST00000451221 567 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 TCEAL4P1-201ENST00000453620 588 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 RPLP0P1-201ENST00000457002 361 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 RNU7-27P-201ENST00000459281 62 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 RN7SL815P-201ENST00000470970 290 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC015724.1-201ENST00000478577 156 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 RPL15P21-201ENST00000495592 567 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC009646.1-201ENST00000510455 318 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 SAP18P1-201ENST00000512058 390 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 ATP5J2P4-201ENST00000538774 267 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC007537.1-201ENST00000539347 327 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 CYCSP2-201ENST00000558168 301 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 MIR5697-201ENST00000578045 78 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AP005119.2-201ENST00000579735 1105 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 DYNLL1P1-201ENST00000595442 269 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AL157899.1-201ENST00000604110 936 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC091488.1-201ENST00000604239 660 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 RN7SL126P-201ENST00000616400 299 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 U1.34-201ENST00000618578 162 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 uc_338.37-201ENST00000620113 186 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC026634.1-201ENST00000634369 198 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHISA3A0PJX4 AC009779.8-201ENST00000641684 4384 ntBASIC5.88□□□□□ -1.47
SHISA3A0PJX4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 Y_RNA.535-201ENST00000384612 99 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 MIR506-201ENST00000384998 124 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 RPL5P20-201ENST00000403848 896 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 RPS3AP3-201ENST00000411933 242 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 IFNA12P-201ENST00000413147 571 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 RBMY2JP-201ENST00000425544 1059 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 IGLV3-4-201ENST00000432300 244 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 MTCYBP45-201ENST00000435243 565 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 RPL23AP19-201ENST00000436229 369 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 DBIL5P2-201ENST00000443827 253 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AL139135.2-201ENST00000445040 433 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 NF1P3-201ENST00000457709 450 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 WBP1LP1-201ENST00000460451 896 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 OR52A4P-201ENST00000472867 958 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC117394.1-201ENST00000477323 567 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC013828.1-201ENST00000481845 158 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 RPS27P23-201ENST00000487608 251 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC090638.1-201ENST00000498296 909 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC106774.2-201ENST00000510266 406 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 KCTD9P2-201ENST00000512203 1013 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 EIF3KP1-201ENST00000513279 656 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 MTND5P4-201ENST00000514978 288 ntBASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.87□□□□□ -1.47
SHISA3A0PJX4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms