Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC073648.1-201ENST00000508957 930 ntBASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 NMNAT3-214ENST00000514703 584 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AP004607.2-201ENST00000533949 322 ntBASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 SNORD39.2-201ENST00000579995 76 ntBASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC012510.1-201ENST00000607946 759 ntBASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 C2orf27A-204ENST00000623058 969 ntBASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 CU639417.4-201ENST00000623928 207 ntBASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 ACTR3BP2-202ENST00000623630 1338 ntBASIC2.41□□□□□ -2.02
LINC01558Q9Y6Z2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 NCAPGP1-201ENST00000505112 1814 ntBASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
LINC01558Q9Y6Z2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 MIR671-201ENST00000390183 118 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 SNORA3C-201ENST00000408792 125 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SKP137-201ENST00000411074 307 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 RPL6P29-201ENST00000414863 865 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC127526.1-201ENST00000417526 366 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC013268.2-201ENST00000420753 337 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AL049610.1-201ENST00000423374 372 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 PPIL1P1-201ENST00000423936 499 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC009303.1-201ENST00000426307 352 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AL645939.3-201ENST00000435408 225 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AL590004.3-202ENST00000445883 451 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 GAPDHP25-201ENST00000447061 1001 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 OR1H1P-201ENST00000448731 937 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 CLIC4P1-201ENST00000453177 535 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SL443P-201ENST00000464331 290 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SL413P-201ENST00000482700 297 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 RPS3AP15-201ENST00000483874 781 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC107956.2-201ENST00000496042 454 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC025554.1-201ENST00000505641 188 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 SNORD116-26-201ENST00000516006 96 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SKP5-201ENST00000517045 272 ntBASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC2.4□□□□□ -2.03
LINC01558Q9Y6Z2 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms