Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 UGT2B26P-201ENST00000508672 1613 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 CASC19-221ENST00000641309 1382 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 SNORA70-201ENST00000384436 135 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AL034403.1-201ENST00000399414 885 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 RN7SKP16-201ENST00000410180 299 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AL356806.1-201ENST00000422524 916 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC092647.2-201ENST00000452998 253 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC069277.2-201ENST00000454211 432 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC104629.2-201ENST00000468627 598 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC005412.2-201ENST00000492004 341 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 RNU6-491P-201ENST00000516099 110 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 RNU6-362P-201ENST00000516736 90 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC109635.6-201ENST00000525487 1113 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 CD24P2-201ENST00000565486 219 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 DPRXP4-201ENST00000578053 568 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 TAS2R6P-201ENST00000605022 826 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AL021707.7-201ENST00000607991 416 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 BX323046.1-201ENST00000610145 535 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC009032.1-201ENST00000617574 431 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AC063976.2-201ENST00000425667 3556 ntBASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ATG4BQ9Y4P1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
ATG4BQ9Y4P1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.84□□□□□ -1.64
ATG4BQ9Y4P1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ATG4BQ9Y4P1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
ATG4BQ9Y4P1 AC104260.2-201ENST00000623551 3497 ntBASIC4.84□□□□□ -1.64
ATG4BQ9Y4P1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.84□□□□□ -1.64
ATG4BQ9Y4P1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 TTC39DP-201ENST00000416781 1688 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 SNORA2.3-201ENST00000383920 135 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 MIR765-201ENST00000390226 114 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 MTND3P20-201ENST00000407663 186 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 U3.32-201ENST00000408116 212 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 RN7SKP114-201ENST00000410327 279 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AL445528.1-201ENST00000426330 420 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 PTMAP6-201ENST00000439110 327 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 RN7SL443P-201ENST00000464331 290 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AC069304.1-201ENST00000491593 704 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AC023424.1-201ENST00000496058 459 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 HAUS1P1-201ENST00000505275 832 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AP002373.2-201ENST00000541631 1060 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 HMGN2P6-201ENST00000551091 273 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 MIR3691-201ENST00000578066 90 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AL139254.3-201ENST00000641097 674 ntBASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4BQ9Y4P1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms