Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RN7SKP160-201ENST00000363804 340 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RNU6-225P-201ENST00000384613 103 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 U3.25-201ENST00000391209 220 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL034403.1-201ENST00000399414 885 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL390316.1-201ENST00000406279 553 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL512422.1-201ENST00000407033 553 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RPL6P29-201ENST00000414863 865 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RCC2P2-201ENST00000422174 918 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL139148.1-201ENST00000427122 680 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 CFL1P1-202ENST00000432948 411 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 MTCO3P17-201ENST00000443775 513 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 Z92846.1-201ENST00000456203 268 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC117394.1-201ENST00000477323 567 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RPS4XP1-201ENST00000482189 787 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC073073.1-201ENST00000493920 463 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 GTF2F2P1-201ENST00000511083 675 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC105031.1-201ENST00000518550 476 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RPL23AP53-201ENST00000521854 457 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC087888.1-201ENST00000550884 1254 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL390726.5-202ENST00000564800 256 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC123786.2-201ENST00000603459 275 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 BNIP3P35-201ENST00000604530 490 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC135068.12-201ENST00000637370 931 ntBASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHBDD3Q9Y3P4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC000123.3-201ENST00000624029 4975 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 RNA5SP183-201ENST00000362452 119 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 MIR600-201ENST00000385007 98 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AL035079.1-201ENST00000405210 287 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 EI24P4-201ENST00000423683 1078 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 CHEK2P5-201ENST00000423877 246 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC108075.1-201ENST00000424692 529 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC092447.2-201ENST00000435487 669 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 RPL12P46-201ENST00000436610 195 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 MRPL35P2-201ENST00000448009 511 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 CALM1P2-201ENST00000452941 448 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AL356981.1-201ENST00000454879 684 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 TPT1P1-201ENST00000458495 518 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 CCDC75P1-201ENST00000469247 791 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 RPL7P39-201ENST00000481157 744 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 RN7SL101P-201ENST00000496350 279 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 PGAM1P13-201ENST00000507497 754 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC005000.1-201ENST00000536192 288 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 PDCD5P1-201ENST00000543528 309 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AL049779.2-201ENST00000553847 315 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC115989.2-201ENST00000578640 563 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 MIR4472-2-201ENST00000582069 67 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 MIR4310-201ENST00000582950 57 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC090948.2-201ENST00000607363 564 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 AC116447.1-201ENST00000613153 453 ntBASIC4.44□□□□□ -1.7
RHBDD3Q9Y3P4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms