Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL138878.2-201ENST00000440581 1241 ntBASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 AC012512.1-201ENST00000446594 718 ntBASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 OR1H1P-201ENST00000448731 937 ntBASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 RAB9BP1-201ENST00000519581 626 ntBASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 SOX5P1-201ENST00000524155 1127 ntBASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 AL133406.3-201ENST00000606817 541 ntBASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 OR8G7P-201ENST00000616658 848 ntBASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 CASC19-206ENST00000641028 1430 ntBASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
NPC1L1Q9UHC9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AC104651.2-201ENST00000447549 528 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AC079168.2-201ENST00000453977 416 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 RPL36AP41-201ENST00000493820 306 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 RN7SKP276-201ENST00000516242 268 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AC133555.2-201ENST00000550213 292 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AC012414.7-202ENST00000622705 1090 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AP000346.3-201ENST00000622821 210 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AL603750.1-201ENST00000624216 1717 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 AL022393.1-201ENST00000625142 1677 ntBASIC6.47□□□□□ -1.37
NPC1L1Q9UHC9 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 VDAC1P6-201ENST00000430062 855 ntBASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 RPL12P18-201ENST00000437175 325 ntBASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 PRELID3BP5-201ENST00000508612 460 ntBASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 MIR7703-201ENST00000620784 77 ntBASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPC1L1Q9UHC9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
NPC1L1Q9UHC9 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.46□□□□□ -1.38
NPC1L1Q9UHC9 NOL8P1-201ENST00000508336 3529 ntBASIC6.46□□□□□ -1.38
NPC1L1Q9UHC9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPC1L1Q9UHC9 AC005261.6-201ENST00000623072 1387 ntBASIC6.46□□□□□ -1.38
NPC1L1Q9UHC9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.46□□□□□ -1.38
NPC1L1Q9UHC9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPC1L1Q9UHC9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
NPC1L1Q9UHC9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 AC096741.1-201ENST00000472250 846 ntBASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 AC012123.2-201ENST00000485809 248 ntBASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 AC006484.1-201ENST00000435086 1884 ntBASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.45□□□□□ -1.38
NPC1L1Q9UHC9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NPC1L1Q9UHC9 RNU1-32P-201ENST00000363937 159 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms