Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 RN7SKP149-201ENST00000363008 344 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 AL035419.1-201ENST00000397037 564 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 RPL10P10-201ENST00000403509 664 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 SNORA79B-201ENST00000410557 148 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 AC007738.1-201ENST00000413892 348 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 AF186996.5-201ENST00000418098 904 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 AL360081.1-201ENST00000428299 555 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 BTG3P1-201ENST00000435859 716 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 AL591623.2-201ENST00000449978 222 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 TPT1P1-201ENST00000458495 518 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 GCSHP4-201ENST00000538792 439 ntBASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.9□□□□□ -1.46
CLIP2Q9UDT6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CLIP2Q9UDT6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.47
CLIP2Q9UDT6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CLIP2Q9UDT6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CLIP2Q9UDT6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.9□□□□□ -1.47
CLIP2Q9UDT6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CLIP2Q9UDT6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AL035079.1-201ENST00000405210 287 ntBASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 SNORA77-201ENST00000408716 125 ntBASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AC091180.1-201ENST00000462104 372 ntBASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AC092324.1-201ENST00000468671 324 ntBASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 EDDM3DP-201ENST00000554692 434 ntBASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AC010547.7-201ENST00000570323 333 ntBASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AL031320.1-201ENST00000604177 357 ntBASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 AC108359.1-201ENST00000616451 1211 ntBASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLIP2Q9UDT6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AL731566.1-201ENST00000620490 1937 ntBASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AL034379.1-201ENST00000423216 253 ntBASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AC008072.1-201ENST00000434254 824 ntBASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AC009117.1-201ENST00000563948 554 ntBASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 ADAM3B-201ENST00000569937 840 ntBASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 BX005214.3-202ENST00000619809 325 ntBASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AL929601.4-201ENST00000613011 1341 ntBASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.88□□□□□ -1.47
CLIP2Q9UDT6 STX3-208ENST00000641815 3236 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AC063976.2-201ENST00000425667 3556 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 SNORA70.10-201ENST00000384515 134 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms