Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AL442128.2-201ENST00000620246 1824 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 SGO1P1-201ENST00000603525 1447 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 AC005224.3-201ENST00000584683 2140 ntBASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.8□□□□□ -1.48
CCM2LQ9NUG4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 SNORA51.1-201ENST00000363243 140 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 Y_RNA.192-201ENST00000363977 102 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 RNU6-157P-201ENST00000383957 107 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 GCNT1P4-201ENST00000404096 329 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AL009174.1-201ENST00000426577 416 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 USP9YP31-201ENST00000431405 881 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 MTND1P29-201ENST00000448112 647 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC079776.3-201ENST00000450665 370 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 RN7SL352P-201ENST00000466002 277 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC093870.1-201ENST00000506837 213 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 HMGB1P23-201ENST00000518743 568 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC087373.1-201ENST00000524920 491 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC135983.3-201ENST00000528049 1226 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 OR8A2P-201ENST00000528631 952 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC010620.1-201ENST00000601088 1102 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC027243.2-201ENST00000602530 724 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC073046.2-201ENST00000604756 527 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC080013.3-201ENST00000606839 578 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AL135999.3-201ENST00000610501 812 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AP000676.3-201ENST00000623299 569 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC016745.2-201ENST00000608834 3443 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AL161756.3-201ENST00000641216 2071 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 ECM1P2-201ENST00000503354 1577 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 AC004076.2-201ENST00000620532 3323 ntBASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCM2LQ9NUG4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 RN7SKP128-201ENST00000364270 303 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 U3.52-201ENST00000384034 216 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 TAF9BP1-201ENST00000396646 746 ntBASIC5.78□□□□□ -1.48
CCM2LQ9NUG4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms