Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AL121839.2-201ENST00000565058 6943 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC020656.2-201ENST00000613291 5309 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 ZFRP1-201ENST00000457579 2970 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 RNU6-398P-201ENST00000384143 109 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC006463.2-201ENST00000473326 348 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC025674.1-201ENST00000507074 324 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 ASNSP4-201ENST00000511103 447 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AC008147.3-201ENST00000548666 354 ntBASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.33□□□□□ -1.72
KIAA1549Q9HCM3 THAP12P5-201ENST00000405864 2275 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AL022322.2-201ENST00000624072 20397 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AC004656.1-201ENST00000568479 4951 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AP001157.1-201ENST00000550837 2339 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AL021331.1-201ENST00000402817 582 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AC097523.2-201ENST00000435551 652 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 TPT1P12-201ENST00000448968 492 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 MORF4L2P1-201ENST00000503761 858 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 NPM1P21-201ENST00000513394 762 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 BGLT3-201ENST00000564523 994 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 LSM1P2-201ENST00000604911 322 ntBASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KIAA1549Q9HCM3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 ATG4AP1-201ENST00000416893 538 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AL513533.1-201ENST00000453728 415 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AC073358.1-201ENST00000505671 684 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 OR51K1P-201ENST00000510214 950 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AC093249.4-201ENST00000564755 259 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 MIR4277-201ENST00000578298 84 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 RAB28P1-201ENST00000411517 641 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AC104763.1-201ENST00000475274 360 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AC015912.2-201ENST00000571053 181 ntBASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KIAA1549Q9HCM3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms