Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL136116.2-201ENST00000404020 785 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 RPL23AP26-201ENST00000412728 464 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 ZYG11AP1-201ENST00000430329 837 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL500522.2-201ENST00000448562 343 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL357559.1-201ENST00000622228 274 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC096664.2-201ENST00000411843 406 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL121576.1-201ENST00000556055 276 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC010653.1-201ENST00000571108 881 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC019322.1-201ENST00000571869 389 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL133481.2-203ENST00000607558 139 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AC092111.2-201ENST00000611627 1414 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 AL031651.1-201ENST00000615357 1438 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 SNORA70.10-201ENST00000384515 134 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 TMBIM7P-201ENST00000418074 855 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 RN7SL188P-201ENST00000469842 285 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AP000547.3-204ENST00000588548 2523 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC063976.2-201ENST00000425667 3556 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AL138820.1-201ENST00000617901 5305 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC025518.1-201ENST00000479856 347 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 RPL36AP41-201ENST00000493820 306 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 CAB39P1-201ENST00000502277 460 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AL133338.2-201ENST00000604292 736 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC136601.2-201ENST00000604356 474 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC096553.1-201ENST00000605169 829 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AC007497.1-201ENST00000610421 561 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AL023881.1-201ENST00000621088 301 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 AL022322.2-201ENST00000624072 20397 ntBASIC4.54□□□□□ -1.68
CHD8Q9HCK8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHD8Q9HCK8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.53□□□□□ -1.68
CHD8Q9HCK8 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms