Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPL31P44-201ENST00000447680 377 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC090602.1-201ENST00000469695 252 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC007998.1-201ENST00000474156 672 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 CBX1P5-201ENST00000475330 559 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC098976.1-201ENST00000513014 541 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 HMGN1P9-201ENST00000515212 298 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC022360.1-201ENST00000521058 340 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AP002812.4-201ENST00000532139 286 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC126365.2-201ENST00000580630 379 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 OR1AB1P-201ENST00000585564 761 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC244107.2-201ENST00000611773 76 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC009269.6-201ENST00000621778 588 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AP001005.3-201ENST00000622049 129 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC132825.7-201ENST00000638744 335 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC005332.5-201ENST00000591222 2919 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 HSPA8P19-201ENST00000505359 1517 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AL445437.1-201ENST00000623157 3087 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC005005.4-201ENST00000623789 16698 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 AC019072.1-201ENST00000604535 1551 ntBASIC5.21□□□□□ -1.58
BRF2Q9HAW0 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AP000473.2-201ENST00000602659 1537 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 IGKV7-3-201ENST00000357453 298 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 RNU6-1000P-201ENST00000391066 106 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 Z93019.1-201ENST00000416450 973 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 FTH1P16-201ENST00000435241 552 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 RPL23AP19-201ENST00000436229 369 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 SUMO2P3-201ENST00000438311 288 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC019185.1-201ENST00000442718 389 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC090804.1-201ENST00000448870 490 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 RPL10P17-201ENST00000453852 316 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 METTL15P1-201ENST00000481421 1045 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 IGBP1P4-201ENST00000503202 879 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC010627.1-201ENST00000503819 1294 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 HMGB1P44-201ENST00000508597 572 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 SNORD46.2-201ENST00000516021 102 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC104115.2-201ENST00000523026 687 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AP004609.2-201ENST00000532177 190 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC087894.1-201ENST00000538359 518 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AP003717.3-201ENST00000544832 1180 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 RN7SL290P-201ENST00000578661 300 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AP000769.2-201ENST00000602344 396 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AL158050.2-201ENST00000605336 568 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AF129408.1-201ENST00000608767 431 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AP000864.1-201ENST00000609424 650 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AC132068.1-201ENST00000623805 459 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 MIR1910-201ENST00000636955 80 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 GVINP1-202ENST00000531871 7271 ntBASIC5.2□□□□□ -1.58
BRF2Q9HAW0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
BRF2Q9HAW0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms