Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL359740.1-201ENST00000624340 592 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 AC005618.4-201ENST00000625053 554 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 HSPD1P11-201ENST00000508643 1702 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS11Q9H270 AC104454.1-201ENST00000421341 1401 ntBASIC5.99□□□□□ -1.45
VPS11Q9H270 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS11Q9H270 CASC19-284ENST00000642142 1868 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
VPS11Q9H270 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 RNU6-1005P-201ENST00000384519 107 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 Y_RNA.559-201ENST00000384686 107 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 RNA5SP156-201ENST00000410250 110 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AL096829.1-201ENST00000413677 457 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC008173.1-201ENST00000418901 264 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC022022.1-201ENST00000430304 178 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 PSMD10P2-201ENST00000432890 672 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AL121601.2-201ENST00000438019 707 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC092601.1-201ENST00000444526 383 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 TAF9P1-201ENST00000445421 515 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 TAF9P2-201ENST00000454958 515 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 RPL21P18-201ENST00000469899 480 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC114324.2-202ENST00000503812 134 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AP002373.2-201ENST00000541631 1060 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AP001823.1-201ENST00000604056 1003 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AC018618.2-201ENST00000604770 446 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AL133481.2-203ENST00000607558 139 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC024941.1-201ENST00000612250 334 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AC009163.6-201ENST00000612367 342 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AC015712.7-201ENST00000615211 635 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AC022400.9-201ENST00000623633 273 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AL008636.1-201ENST00000625038 1018 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 ZNF663P-202ENST00000641770 1131 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.98□□□□□ -1.45
VPS11Q9H270 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS11Q9H270 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
VPS11Q9H270 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS11Q9H270 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.97□□□□□ -1.45
VPS11Q9H270 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS11Q9H270 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
VPS11Q9H270 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS11Q9H270 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS11Q9H270 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS11Q9H270 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS11Q9H270 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS11Q9H270 Y_RNA.77-201ENST00000362962 107 ntBASIC5.97□□□□□ -1.45
VPS11Q9H270 SNORD56.4-201ENST00000363883 71 ntBASIC5.97□□□□□ -1.45
VPS11Q9H270 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS11Q9H270 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
VPS11Q9H270 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS11Q9H270 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms