Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC007562.1-201ENST00000421819 517 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL139158.1-201ENST00000424719 340 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL590128.1-201ENST00000433407 286 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC003989.1-201ENST00000434569 565 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC023274.2-201ENST00000445264 521 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 TPMTP4-201ENST00000450749 678 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 RN7SL221P-201ENST00000466190 281 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC022415.1-202ENST00000486612 523 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC005178.1-201ENST00000508392 440 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC008494.2-201ENST00000514544 370 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 HIGD1AP6-201ENST00000521833 279 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AP000859.1-201ENST00000525536 307 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC068714.1-201ENST00000559623 800 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC090651.1-201ENST00000567865 634 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC115085.1-201ENST00000588924 229 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC010487.1-201ENST00000594408 1172 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC133552.5-201ENST00000604266 540 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC009163.6-201ENST00000612367 342 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC012676.3-201ENST00000614983 479 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL591926.1-201ENST00000620542 217 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AP000550.3-201ENST00000637734 379 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL592429.1-201ENST00000403909 1473 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AL390862.1-201ENST00000635467 1469 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 LYARP1-201ENST00000436977 1501 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 AC007342.5-201ENST00000571340 2142 ntBASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM55Q9BYV6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC074141.1-201ENST00000588129 2995 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AOX3P-204ENST00000491025 2107 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AL512646.1-201ENST00000269395 1077 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 RPS3AP26-201ENST00000398259 784 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AL139098.1-201ENST00000407291 389 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 RPL23AP47-201ENST00000408017 460 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 U3.43-201ENST00000410734 213 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 RNU6-272P-201ENST00000411028 104 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 UBE2V1P14-201ENST00000415815 558 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 SEPT7P3-201ENST00000455017 621 ntBASIC6.37□□□□□ -1.39
TRIM55Q9BYV6 AC099340.1-201ENST00000475247 599 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms